Evidence map›Paper›PMID 36790468›Full record

ArticleHistochemistry and cell biology2023

Air-liquid interface cultures trigger a metabolic shift in intestinal epithelial cells (IPEC-1).

Martin Stollmeier, Stefan Kahlert, Werner Zuschratter, Michael Oster, Klaus Wimmers, Berend Isermann, Hermann-Josef Rothkötter, Constanze Nossol

Open access · hybridAbstract read
In one paragraph

Article in Histochemistry and cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
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  4. In focus in HCB.Histochemistry and cell biology · 2024
    Article
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  6. In focus in HCB.Histochemistry and cell biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Martin StollmeierInstitute of Anatomy Medical Faculty, Otto-Von-Guericke University, 39120, Magdeburg, Germany.
Stefan KahlertInstitute of Anatomy Medical Faculty, Otto-Von-Guericke University, 39120, Magdeburg, Germany.
Werner ZuschratterLeibniz Institute for Neurobiology, Otto-Von-Guericke University, 39120, Magdeburg, Germany.
Michael OsterResearch Institute for Farm Animal Biology, 18196, Dummerstorf, Germany.
Klaus WimmersResearch Institute for Farm Animal Biology, 18196, Dummerstorf, Germany.
Berend IsermannInstitute of Laboratory Medicine, Clinical Chemistry and Molecular Diagnostics, University of Leipzig, 04103, Leipzig, Germany.
Hermann-Josef RothkötterInstitute of Anatomy Medical Faculty, Otto-Von-Guericke University, 39120, Magdeburg, Germany.
Constanze NossolInstitute of Anatomy Medical Faculty, Otto-Von-Guericke University, 39120, Magdeburg, Germany. constanze.nossol@med.ovgu.de.
Otto-von-Guericke University Magdeburg · DEResearch Institute for Farm Animal Biology (FBN) · DELeipzig University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An improved oxygen availability in air-liquid interface (ALI) cultures of enterocytes of the small intestine seems to be primarily responsible for morphological, metabolic, and functional changes. Intestinal porcine epithelial cells 1 (IPEC-1) are less investigated and are rarely used as model for intestinal barrier but showed a profound change of cell shape during ALI cultivation. We aim to answer the following question: Are the observed morphological effects accompanied by changes in metabolic function? A microarray analysis of submerged culture (SMC) and ALI cultures identified 830 significantly regulated genes. Subsequent functional clustering revealed alterations in 31 pathways, with the highest number of regulated genes in metabolic pathways, carbon metabolism, glycolysis, and hypoxia-inducible factor (HIF) signaling. Furthermore, HIF-1α as a mediator of a metabolic switch between glycolysis and oxidative phosphorylation showed a trend of increased mRNA levels in ALI in contrast to a reduced nuclear HIF-1α content in the nucleus. Candidate genes of oxidative phosphorylation such as a mitochondrial marker exhibited enhanced mRNA levels, which was confirmed by western blot analysis. Cytochrome C oxidase (COX) subunit 5B protein was decreased in ALI, although mRNA level was increased. The oxidation of ferrocytochrome C to ferricytochrome C was used for detection of cytochrome C oxidase activity of isolated mitochondria and resulted in a trend of higher activity in ALI. Furthermore, quantification of glucose and lactate concentrations in cell culture medium revealed significantly reduced glucose levels and decreased lactate production in ALI. To evaluate energy metabolism, we measured cellular adenosine triphosphate (ATP) aggregation in homogenized cell suspensions showing similar levels. However, application of the uncoupling agent FCCP reduced ATP levels in ALI but not in SMC. In contrast, blocking with 2-desoxy-D-glucose (2DG) significantly reduced ATP content in ALI and SMC. These results indicate a metabolic shift in IPEC-1 cultured under ALI conditions enhancing oxidative phosphorylation and suppressing glycolysis.

Indexed as

Electron Transport Complex IVEpithelial CellsAdenosine TriphosphateAnimalsGlucoseHypoxia-Inducible Factor 1, alpha SubunitLactatesRNA, MessengerSwineAdenosine TriphosphateElectron Transport Complex IVGlucoseHypoxia-Inducible Factor 1, alpha SubunitLactatesRNA, MessengerAir–liquid interfaceALIATPGlucoseHIF-1αIPECLactateMetabolismMicroarray

Identifiers

PMID36790468
PMCPMC10191962
OpenAlexW4320857526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.