Evidence map›Paper›PMID 36788504›Full record

ArticleBMC medical informatics and decision making2023

Subsequence and distant supervision based active learning for relation extraction of Chinese medical texts.

Qi Ye, Tingting Cai, Xiang Ji, Tong Ruan, Hong Zheng

Abstract read
In one paragraph

Article in BMC medical informatics and decision making, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Qi YeSchool of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China. yeh_qi1125@ecust.edu.cn.
Tingting CaiSchool of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China.
Xiang JiSchool of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China.
Tong RuanSchool of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China.
Hong ZhengSchool of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China.

Funding

the National Key Research and Development Program of China 2021YFC2701800the Zhejiang Lab 2019ND0AB01
6 · The paper itself

Abstract

In recent years, relation extraction on unstructured texts has become an important task in medical research. However, relation extraction requires a large amount of labeled corpus, manually annotating sequences is time consuming and expensive. Therefore, efficient and economical methods for annotating sequences are required to ensure the performance of relational extraction. This paper proposes a method of subsequence and distant supervision based active learning. The method is annotated by selecting information-rich subsequences as a sampling unit instead of the full sentences in traditional active learning. Additionally, the method saves the labeled subsequence texts and their corresponding labels in a dictionary which is continuously updated and maintained, and pre-labels the unlabeled set through text matching based on the idea of distant supervision. Finally, the method combines a Chinese-RoBERTa-CRF model for relation extraction in Chinese medical texts. Experimental results test on the CMeIE dataset achieves the best performance compared to existing methods. And the best F1 value obtained between different sampling strategies is 55.96%.

Indexed as

Problem-Based LearningSupervised Machine LearningChinaLanguageReference Books, MedicalActive learningDistant supervisionMedical textsRelation extractionSequence tagging

Identifiers

PMID36788504
PMCPMC9926422

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.