Evidence map›Paper›PMID 36788246›Full record

ArticleNature communications2023

Resistance of Omicron subvariants BA.2.75.2, BA.4.6, and BQ.1.1 to neutralizing antibodies.

Delphine Planas, Timothée Bruel, Isabelle Staropoli, Florence Guivel-Benhassine, Françoise Porrot, Piet Maes, Ludivine Grzelak, Matthieu Prot, Said Mougari, Cyril Planchais and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  4. A Randomized Controlled Study Assessing Convalescent Immunoglobulins vs Convalescent Plasma for Hospitalized Patients With Coronavirus 2019.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2023
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63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors.

Delphine PlanasVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France. delphine.planas@pasteur.fr.
Timothée BruelVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France.ORCID 0000-0002-3952-4261
Isabelle StaropoliVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France.
Florence Guivel-BenhassineVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France.
Françoise PorrotVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France.ORCID 0000-0001-8995-3614
Piet MaesKU Leuven, Department of Microbiology, Immunology and Transplantation, Laboratory of Clinical and Epidemiological Virology, Leuven, Belgium.ORCID 0000-0002-4571-5232
Ludivine GrzelakVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France.
Matthieu ProtG5 Evolutionary Genomics of RNA Viruses, Institut Pasteur, Université Paris Cité, Paris, France.
Said MougariG5 Evolutionary Genomics of RNA Viruses, Institut Pasteur, Université Paris Cité, Paris, France.
Cyril PlanchaisHumoral Immunology Laboratory, Institut Pasteur, Université Paris Cité, INSERM U1222, Paris, France.
Julien PuechLaboratoire de Virologie, Service de Microbiologie, Hôpital Européen Georges Pompidou, Paris, France.
Madelina SalibaLaboratoire de Virologie, Service de Microbiologie, Hôpital Européen Georges Pompidou, Paris, France.
Riwan SahraouiLaboratoire de Virologie, Service de Microbiologie, Hôpital Européen Georges Pompidou, Paris, France.
Florent FémyService d'accueil des urgences, Hôpital Européen Georges Pompidou, Paris, France.
Nathalie MorelService de Pharmacologie et Immunoanalyse (SPI), CEA, INRA, Université Paris-Saclay, F-91191, Gif-sur Yvette, France.ORCID 0000-0002-3223-2071
Jérémy DuflooInstitute for Integrative Systems Biology (I2SysBio), Universitat de València-CSIC, 46980 Paterna, València, Spain.ORCID 0000-0002-4963-1378
Rafael SanjuánInstitute for Integrative Systems Biology (I2SysBio), Universitat de València-CSIC, 46980 Paterna, València, Spain.ORCID 0000-0002-1844-545X
Hugo MouquetHumoral Immunology Laboratory, Institut Pasteur, Université Paris Cité, INSERM U1222, Paris, France.
Emmanuel AndréUniversity Hospitals Leuven, Department of Laboratory Medicine, National Reference Centre for Respiratory Pathogens, Leuven, Belgium.
Laurent HocquelouxCHR d'Orléans, Service de Maladies Infectieuses, Orléans, France.ORCID 0000-0002-2264-4822
Etienne Simon-LoriereG5 Evolutionary Genomics of RNA Viruses, Institut Pasteur, Université Paris Cité, Paris, France.ORCID 0000-0001-8420-7743
David VeyerLaboratoire de Virologie, Service de Microbiologie, Hôpital Européen Georges Pompidou, Paris, France.
Thierry Prazuck *CHR d'Orléans, Service de Maladies Infectieuses, Orléans, France.
Hélène Péré *Laboratoire de Virologie, Service de Microbiologie, Hôpital Européen Georges Pompidou, Paris, France.
Olivier SchwartzVirus and Immunity Unit, Institut Pasteur, Université Paris Cité, CNRS UMR3569, Paris, France. olivier.schwartz@pasteur.fr.ORCID 0000-0002-0729-1475

Funding

Inter-regional study of transmission, adaptation and pathogenesis of viruses with pandemic potential in Southeast Asia and West/Central AfricaU01AI151758 · NIAID · INSTITUT PASTEUR · PI SAKUNTABHAI, ANAVAJ, SIMON-LORIERE, ETIENNE · 2020 to 2024
$6.7M
NIAID NIH HHS U01 AI151758
6 · The paper itself

Abstract

Convergent evolution of SARS-CoV-2 Omicron BA.2, BA.4, and BA.5 lineages has led to the emergence of several new subvariants, including BA.2.75.2, BA.4.6. and BQ.1.1. The subvariant BQ.1.1 became predominant in many countries in December 2022. The subvariants carry an additional and often redundant set of mutations in the spike, likely responsible for increased transmissibility and immune evasion. Here, we established a viral amplification procedure to easily isolate Omicron strains. We examined their sensitivity to 6 therapeutic monoclonal antibodies (mAbs) and to 72 sera from Pfizer BNT162b2-vaccinated individuals, with or without BA.1/BA.2 or BA.5 breakthrough infection. Ronapreve (Casirivimab and Imdevimab) and Evusheld (Cilgavimab and Tixagevimab) lose antiviral efficacy against BA.2.75.2 and BQ.1.1, whereas Xevudy (Sotrovimab) remaine weakly active. BQ.1.1 is also resistant to Bebtelovimab. Neutralizing titers in triply vaccinated individuals are low to undetectable against BQ.1.1 and BA.2.75.2, 4 months after boosting. A BA.1/BA.2 breakthrough infection increases these titers, which remains about 18-fold lower against BA.2.75.2 and BQ.1.1, than against BA.1. Reciprocally, a BA.5 breakthrough infection increases more efficiently neutralization against BA.5 and BQ.1.1 than against BA.2.75.2. Thus, the evolution trajectory of novel Omicron subvariants facilitates their spread in immunized populations and raises concerns about the efficacy of most available mAbs.

Indexed as

Antibodies, NeutralizingBNT162 VaccineCOVID-19SARS-CoV-2Antibodies, ViralAntiviral AgentsBreakthrough InfectionsHumansSpike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralAntiviral AgentsBNT162 VaccineSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID36788246
PMCPMC9926440

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.