Evidence map›Paper›PMID 36788019›Full record

ArticleJournal of medical genetics2023

Recurrent, founder and hypomorphic variants contribute to the genetic landscape of Joubert syndrome.

Valentina Serpieri, Giulia Mortarini, Hailey Loucks, Tommaso Biagini, Alessia Micalizzi, Ilaria Palmieri, Jennifer C Dempsey, Fulvio D'Abrusco, Concetta Mazzotta, Roberta Battini and 18 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  6. Review
  7. Novel compound heterozygous variants in theFrontiers in pediatrics · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 14 institutions in 8 countries.

Valentina SerpieriNeurogenetics Research Centre, IRCCS Mondino Foundation, Pavia, Italy.ORCID 0000-0002-3553-0066
Giulia MortariniDepartment of Molecular Medicine, University of Pavia, Pavia, Italy.
Hailey LoucksDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Tommaso BiaginiBioinformatics Unit, Fondazione IRCCS Casa Sollievo della Sofferenza, S. Giovanni Rotondo, Foggia, Italy.
Alessia MicalizziLaboratory of Medical Genetics, IRCCS Bambino Gesù Children's Hospital, Rome, Italy.
Ilaria PalmieriNeurogenetics Research Centre, IRCCS Mondino Foundation, Pavia, Italy.
Jennifer C DempseyDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Fulvio D'AbruscoDepartment of Molecular Medicine, University of Pavia, Pavia, Italy.
Concetta MazzottaDepartment of Molecular Medicine, University of Pavia, Pavia, Italy.
Roberta BattiniDepartment of Neuroscience, IRCCS Stella Maris Foundation, Pisa, Italy.
Enrico Silvio BertiniUnit of Neuromuscular and Neurodegenerative Disorders, IRCCS Ospedale Pediatrico Bambino Gesù, Rome, Italy.ORCID 0000-0001-9276-4590
Eugen BoltshauserDepartement of Pediatric Neurology, University Children's Hospital Zürich, Zurich, Switzerland.
Renato BorgattiDepartment of Brain and Behavioral Sciences, University of Pavia, Pavia, Italy.
Knut BrockmannInterdisciplinary Pediatric Centre for Children with Developmental Disabilities and Severe Chronic Disorders, University Medical Centre, Georg August University, Göttingen, Germany.
Stefano D'ArrigoDepartment of Pediatric Neuroscience, Fondazione IRCCS Istituto Neurologico "C Besta", Milan, Italy.ORCID 0000-0001-5188-9418
Nardo NardocciDepartment of Pediatric Neuroscience, Fondazione IRCCS Istituto Neurologico "C Besta", Milan, Italy.
Rita FischettoClinical Genetics Unit, Department of Pediatric Medicine, Giovanni XXIII Children's Hospital, Bari, Italy.
Emanuele AgoliniLaboratory of Medical Genetics, IRCCS Bambino Gesù Children's Hospital, Rome, Italy.ORCID 0000-0001-6543-6225
Antonio NovelliLaboratory of Medical Genetics, IRCCS Bambino Gesù Children's Hospital, Rome, Italy.
Alfonso RomanoSection of Pediatrics, Department of Medical Translational Sciences, University of Naples Federico II, Naples, Italy.
Romina RomanielloChild Neurology and Psychiatry Unit, IRCCS Mondino Foundation, Pavia, Italy.ORCID 0000-0002-8709-6732
Franco StanzialGenetic Counseling Service, Department of Pediatrics, Regional Hospital of Bozen, Bozen, Italy.
Sabrina SignoriniChild Neurology and Psychiatry Unit, IRCCS Mondino Foundation, Pavia, Italy.
Pietro StrisciuglioSection of Pediatrics, Department of Medical Translational Sciences, University of Naples Federico II, Naples, Italy.
Simone GanaNeurogenetics Research Centre, IRCCS Mondino Foundation, Pavia, Italy.
Tommaso MazzaBioinformatics Unit, Fondazione IRCCS Casa Sollievo della Sofferenza, S. Giovanni Rotondo, Foggia, Italy.ORCID 0000-0003-0434-8533
Dan DohertyDepartment of Pediatrics, University of Washington, Seattle, Washington, USA.
Enza Maria ValenteNeurogenetics Research Centre, IRCCS Mondino Foundation, Pavia, Italy enzamaria.valente@unipv.it.ORCID 0000-0002-0600-6820
University of Pavia · ITFondazione Istituto Neurologico Nazionale Casimiro Mondino · ITLaboratory of Molecular Genetics · PLUniversity of Washington · USCasa Sollievo della Sofferenza · ITFondazione IRCCS Istituto Neurologico Carlo Besta · ITUniversity of Naples Federico II · ITUrology Foundation · GBInstitute for Neurodegenerative Disorders · USOspedale di Bolzano · ITOspedale Pediatrico Giovanni XXIII · ITUniversity Children's Hospital Zurich · CHUniversity of Göttingen · DEUniversity of Pisa · IT

Funding

WUIDDRC Supplement-Supporting the health and well-being of children with intellectual and developmental disability during COVID-19 pandemicP50HD103525 · NICHD · WASHINGTON UNIVERSITY · PI JEFFREY D MILBRANDT · 2020 to 2026
$15.5M
Mechanisms of Brain Dysmorphology in MN1 C-Terminal Truncation Syndrome, a Novel Intellectual Developmental Disability Disorder P50HD103524 · NICHD · UNIVERSITY OF WASHINGTON · PI DANIEL DOHERTY · 2020 to 2026
$9.9M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI GURALNICK, MICHAEL J · 2014 to 2019
$7.9M
Identifying the missing heritability in recessive disorders using Joubert syndrome as a modelR01HD100730 · NICHD · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2020 to 2023
$2.0M
Joubert syndrome and related disorders of hindbrain developmentR01NS064077 · NINDS · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2010 to 2014
$1.8M
NICHD NIH HHS P50 HD103524NICHD NIH HHS P50 HD103525NICHD NIH HHS R01 HD100730NICHD NIH HHS U54 HD083091NINDS NIH HHS R01 NS064077
6 · The paper itself

Abstract

backgroundJoubert syndrome (JS) is a neurodevelopmental ciliopathy characterised by a distinctive mid-hindbrain malformation, the 'molar tooth sign'. Over 40 JS-associated genes are known, accounting for two-thirds of cases.

methodsWhile most variants are novel or extremely rare, we report on 11 recurring variants in seven genes, including three known 'founder variants' in the Ashkenazi Jewish, Hutterite and Finnish populations. We evaluated variant frequencies in ~550 European patients with JS and compared them with controls (>15 000 Italian plus gnomAD), and with an independent cohort of ~600 JS probands from the USA.

resultsAll variants were markedly enriched in the European JS cohort compared with controls. When comparing allele frequencies in the two JS cohorts, the Ashkenazim founder variant (

conclusionThis study contributes to understand the complex genetic landscape of JS, explain its variable prevalence in distinct geographical areas and characterise two recurrent hypomorphic variants.

Indexed as

Abnormalities, MultipleEye AbnormalitiesKidney Diseases, CysticCerebellumHumansRetinaCerebellar DiseasesFounder EffectGene FrequencyGenetic Carrier ScreeningGenotype

Identifiers

PMID36788019
PMCPMC10447400
OpenAlexW4320719522

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.