Evidence map›Paper›PMID 36787361›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Split aminoacyl-tRNA synthetases for proximity-induced stop codon suppression.

Han-Kai Jiang, Nicole L Ambrose, Christina Z Chung, Yane-Shih Wang, Dieter Söll, Jeffery M Tharp

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  9. Therapeutic Fusion Proteins.The AAPS journal · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Han-Kai JiangDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511.
Nicole L AmbroseDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511.
Christina Z ChungDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511.
Yane-Shih WangInstitute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.
Dieter SöllDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511.ORCID 0000-0002-3077-8986
Jeffery M TharpDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202.
Yale University · USIndiana University School of MedicineNational Taiwan University · TWNational Tsing Hua University · TW

Funding

Studies of Transfer RNAR35GM122560 · NIGMS · YALE UNIVERSITY · PI SOLL, DIETER · 2017 to 2022
$5.6M
Genetically encoded bicyclic peptide libraries for the discoveryof novel antiviral agentsR00GM141320 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI THARP, JEFFERY MICHEAL · 2023 to 2025
$866k
Genetically encoded bicyclic peptide libraries for the discoveryof novel antiviral agentsK99GM141320 · NIGMS · YALE UNIVERSITY · PI THARP, JEFFERY MICHEAL · 2021 to 2021
$95k
NIGMS NIH HHS K99 GM141320NIGMS NIH HHS R00 GM141320NIGMS NIH HHS R35 GM122560
6 · The paper itself

Abstract

Synthetic biology tools for regulating gene expression have many useful biotechnology and therapeutic applications. Most tools developed for this purpose control gene expression at the level of transcription, and relatively few methods are available for regulating gene expression at the translational level. Here, we design and engineer split orthogonal aminoacyl-tRNA synthetases (o-aaRS) as unique tools to control gene translation in bacteria and mammalian cells. Using chemically induced dimerization domains, we developed split o-aaRSs that mediate gene expression by conditionally suppressing stop codons in the presence of the small molecules rapamycin and abscisic acid. By activating o-aaRSs, these molecular switches induce stop codon suppression, and in their absence stop codon suppression is turned off. We demonstrate, in

Indexed as

Amino Acyl-tRNA SynthetasesCodon, TerminatorEscherichia coliHumansLigasesProtein BiosynthesisRNA, TransferAmino Acyl-tRNA SynthetasesCodon, TerminatorLigasesRNA, Transfergenetic code expansionnoncanonical amino acidspyrrolysyl-tRNA synthetasestop codon suppressionsynthetic biology

Identifiers

PMID36787361
PMCPMC9974479
OpenAlexW4320711659

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.