Evidence map›Paper›PMID 36786577›Full record

ArticlemBio2023

Amino Acid Availability Determines Plant Immune Homeostasis in the Rhizosphere Microbiome.

Yang Liu, Andrew J Wilson, Jiatong Han, Alisa Hui, Lucy O'Sullivan, Tao Huan, Cara H Haney

Open access · goldAbstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  5. Plant growth-promoting microbes and microalgae-based biostimulants: sustainable strategy for agriculture and abiotic stress resilience.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Yang LiuDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.ORCID 0000-0002-8605-1719
Andrew J WilsonDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Jiatong HanDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Alisa HuiDepartment of Chemistry, The University of British Columbia, Vancouver, Canada.
Lucy O'SullivanDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, USA.
Tao HuanDepartment of Chemistry, The University of British Columbia, Vancouver, Canada.
Cara H HaneyDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.ORCID 0000-0002-6099-6677
University of British Columbia · CAMassachusetts General Hospital · US

Funding

Genetic Analysis of the Plant Defense ResponseR37GM048707 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI AUSUBEL, FREDERICK M · 2005 to 2014
$5.5M
NIGMS NIH HHS R37 GM048707
6 · The paper itself

Abstract

Microbes possess conserved microbe-associated molecular patterns (MAMPs) that are recognized by plant receptors to induce pattern-triggered immunity (PTI). Despite containing the same MAMPs as pathogens, commensals thrive in the plant rhizosphere microbiome, indicating they must suppress or evade host immunity. Previous work found that bacterial-secreted gluconic acid is sufficient to suppress PTI. Here, we show that gluconic acid biosynthesis is not necessary for immunity suppression by the beneficial bacterial strain Pseudomonas simiae WCS417. We performed a forward genetic screen with EMS-mutagenized

Indexed as

ArabidopsisMicrobiotaAmino AcidsArginineBacteriaGluconatesHomeostasisOrnithinePlant ImmunityPlant RootsRhizosphereSoil MicrobiologyAmino AcidsArginineGluconatesgluconic acidOrnithineamino acid biosynthesisinnate immunitypHplant-microbe interactionsPTIrhizosphere-inhabiting microbes

Identifiers

PMID36786577
PMCPMC10127609
OpenAlexW4320709262

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.