Evidence map›Paper›PMID 36786571›Full record

ArticlemBio2023

Tundra Soil Viruses Mediate Responses of Microbial Communities to Climate Warming.

Mengzhi Ji, Xiangyu Fan, Carolyn R Cornell, Ya Zhang, Mengting Maggie Yuan, Zhen Tian, Kaili Sun, Rongfeng Gao, Yang Liu, Jizhong Zhou

Open access · goldAbstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

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  13. Soil viral-host interactions regulate microplastic-dependent carbon storage.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Mengzhi Ji *School of Biological Science and Technology, University of Jinan, Jinan, Shandong Province, China.
Xiangyu Fan *School of Biological Science and Technology, University of Jinan, Jinan, Shandong Province, China.ORCID 0000-0002-1376-0039
Carolyn R CornellInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.ORCID 0000-0001-5355-3248
Ya ZhangInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Mengting Maggie YuanDepartment of Environmental Science, Policy, and Management, University of California, Berkeley, California, USA.
Zhen TianSchool of Biological Science and Technology, University of Jinan, Jinan, Shandong Province, China.
Kaili SunSchool of Biological Science and Technology, University of Jinan, Jinan, Shandong Province, China.
Rongfeng GaoSchool of Biological Science and Technology, University of Jinan, Jinan, Shandong Province, China.
Yang LiuSchool of Biological Science and Technology, University of Jinan, Jinan, Shandong Province, China.
Jizhong ZhouInstitute for Environmental Genomics and Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
University of Jinan · CNUniversity of Oklahoma · USLawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rise of global temperature causes the degradation of the substantial reserves of carbon (C) stored in tundra soils, in which microbial processes play critical roles. Viruses are known to influence the soil C cycle by encoding auxiliary metabolic genes and infecting key microorganisms, but their regulation of microbial communities under climate warming remains unexplored. In this study, we evaluated the responses of viral communities for about 5 years of experimental warming at two depths (15 to 25 cm and 45 to 55 cm) in the Alaskan permafrost region. Our results showed that the viral community and functional gene composition and abundances (including viral functional genes related to replication, structure, infection, and lysis) were significantly influenced by environmental conditions such as total nitrogen (N), total C, and soil thawing duration. Although long-term warming did not impact the viral community composition at the two depths, some glycoside hydrolases encoded by viruses were more abundant at both depths of the warmed plots. With the continuous reduction of total C, viruses may alleviate methane release by altering infection strategies on methanogens. Importantly, viruses can adopt lysogenic and lytic lifestyles to manipulate microbial communities at different soil depths, respectively, which could be one of the major factors causing the differences in microbial responses to warming. This study provides a new ecological perspective on how viruses regulate the responses of microbes to warming at community and functional scales.

Indexed as

MicrobiotaVirusesBiodiversityCarbonClimate ChangeSoilSoil MicrobiologyTemperatureTundraCarbonSoilclimate warmingenvironmental factorsglycoside hydrolasesviral lifestylevirus-host linkagevirus-microbe linkage

Identifiers

PMID36786571
PMCPMC10127799
OpenAlexW4320710608

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.