Evidence map›Paper›PMID 36786316›Full record

ArticleJournal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc2023

Development of a direct duplex real-time PCR assay for rapid detection of domestic cat hepadnavirus.

Maya Shofa, Akiho Ohkawa, Tamaki Okabayashi, Yasuyuki Kaneko, Akatsuki Saito

Open access · greenAbstract read
In one paragraph

Article in Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Maya ShofaDepartment of Veterinary Science, University of Miyazaki, Miyazaki, Japan.ORCID 0000-0002-3577-9718
Akiho OhkawaDepartment of Veterinary Science, University of Miyazaki, Miyazaki, Japan.
Tamaki OkabayashiDepartment of Veterinary Science, University of Miyazaki, Miyazaki, Japan.
Yasuyuki KanekoVeterinary Teaching Hospital, University of Miyazaki, Miyazaki, Japan.
Akatsuki SaitoDepartment of Veterinary Science, University of Miyazaki, Miyazaki, Japan.ORCID 0000-0002-2792-4399
University of Miyazaki · JPUniversity of Miyazaki Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Domestic cat hepadnavirus (DCH) is a novel hepadnavirus, first identified in 2018. DCH is generally detected using conventional PCR assays, which include time-consuming agarose gel electrophoresis. We developed a rapid, sensitive, and specific real-time PCR (rtPCR) assay for the detection of the DCH genome. To streamline the procedure, our rtPCR assay was carried out using blood samples, without DNA extraction. A consensus primers/probe set was designed based on the nucleotide sequences of the surface/polymerase gene of all DCH strains available in GenBank. To exclude the possibility that the PCR reaction was blocked by anticoagulants, we also used a primers/probe set for amplifying the cat beta-actin gene as a reference gene. Our direct duplex rtPCR assay had high sensitivity, with a limit of detection of 10 copies/μL of blood for DCH. Our direct duplex rtPCR assay should be a useful tool for DCH detection and surveillance.

Indexed as

HepadnaviridaeAnimalsBase SequenceCatsDNA PrimersNucleic Acid Amplification TechniquesReal-Time Polymerase Chain ReactionSensitivity and SpecificityDNA Primersdirect duplex real-time PCR assaydomestic cat hepadnavirus

Identifiers

PMID36786316
PMCPMC9999387
OpenAlexW4320709077

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.