Evidence map›Paper›PMID 36782375›Full record

ArticleThe journal of pathology. Clinical research2023

The activation of EP300 by F11R leads to EMT and acts as a prognostic factor in triple-negative breast cancers.

Chien-Hsiu Li, Chih-Yeu Fang, Ming-Hsien Chan, Pei-Jung Lu, Luo-Ping Ger, Jan-Show Chu, Yu-Chan Chang, Chi-Long Chen, Michael Hsiao

Open access · goldAbstract read
In one paragraph

Article in The journal of pathology. Clinical research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 1 country.

Chien-Hsiu Li *Genomics Research Center, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-4648-3744
Chih-Yeu Fang *National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Miaoli, Taiwan.ORCID 0000-0002-8280-3012
Ming-Hsien ChanGenomics Research Center, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-5633-8911
Pei-Jung LuInstitute of Clinical Medicine, College of Medicine, National Cheng Kung University, Tainan, Taiwan.ORCID 0000-0002-8143-5668
Luo-Ping GerDepartment of Medical Education and Research, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan.
Jan-Show ChuDepartment of Pathology, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.ORCID 0000-0003-4872-4801
Yu-Chan ChangDepartment of Biomedical Imaging and Radiological Sciences, National Yang Ming Chiao Tung University, Taipei, Taiwan.ORCID 0000-0003-0474-9935
Chi-Long ChenDepartment of Pathology, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.ORCID 0000-0003-2875-1669
Michael HsiaoGenomics Research Center, Academia Sinica, Taipei, Taiwan.ORCID 0000-0001-8529-9213
Genomics Research Center, Academia Sinica · TWTaipei Medical University Hospital · TWNational Cheng Kung University Hospital · TWNational Health Research Institutes · TWNational Sun Yat-sen University · TWNational Taiwan University · TWNational Yang Ming Chiao Tung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancer progression is influenced by junctional adhesion molecule (JAM) family members. The relationship between JAM family members and different types of cancer was examined using The Cancer Genome Atlas dataset. mRNA levels of the F11R (F11 receptor) in tumours were inversely correlated to the expression of JAM-2 and JAM-3. This relationship was unique to breast cancer (BCa) and was associated with poor prognosis (p = 0.024, hazard ratio = 1.44 [1.05-1.99]). A 50-gene molecular signature (prediction analysis of microarray 50) was used to subtype BCa. F11R mRNA expression significantly increased in human epidermal growth factor receptor 2 (HER2)-enriched (p = 0.0035) and basal-like BCa tumours (p = 0.0005). We evaluated F11R protein levels in two different compositions of BCa subtype patient tissue array cohorts to determine the relationship between BCa subtype and prognosis. Immunohistochemistry staining revealed that a high F11R protein level was associated with poor overall survival (p < 0.001; Taipei Medical University [TMU] cohort, p < 0.001; Kaohsiung Veterans General Hospital [KVGH] cohort) or disease-free survival (p < 0.001 [TMU cohort], p = 0.034 [KVGH cohort]) in patients with BCa. Comparison of F11R levels in different subtypes revealed the association of poor prognosis with high levels of F11R among luminal (p < 0.001 [TMU cohort], p = 0.027 [KVGH cohort]), HER2 positive (p = 0.018 [TMU cohort], p = 0.037 [KVGH cohort]), and triple-negative (p = 0.013 [TMU cohort], p = 0.037 [KVGH cohort]) BCa. F11R-based RNA microarray analysis and Ingenuity Pathway Analysis were successful in profiling the detailed gene ontology of triple-negative BCa cells regulated by F11R. The EP300 transcription factor was highly correlated with F11R in BCa (R = 0.51, p < 0.001). By analysing these F11R-affected molecules with the L1000CDs datasets, we were able to predict some repurposing drugs for potential application in F11R-positive BCa treatment.

Indexed as

Cell Adhesion MoleculesTriple Negative Breast NeoplasmsE1A-Associated p300 ProteinHumansPrognosisReceptors, Cell SurfaceRNA, MessengerCell Adhesion MoleculesE1A-Associated p300 ProteinEP300 protein, humanF11R protein, humanReceptors, Cell SurfaceRNA, Messengerbreast cancerEP300F11Rsurvival curvetranscriptomics

Identifiers

PMID36782375
PMCPMC10073929
OpenAlexW4320709368

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.