Evidence map›Paper›PMID 36782146›Full record

ArticleBMC genomic data2023

Comparison of microsatellite distribution in the genomes of Pteropus vampyrus and Miniopterus natalensis (Chiroptera).

Weiwei Shao, Wei Cai, Fen Qiao, Zhihua Lin, Li Wei

Open access · goldAbstract read
In one paragraph

Article in BMC genomic data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Weiwei ShaoCollege of Ecology, Lishui University, Lishui, 323000, Zhejiang, People's Republic of China.
Wei CaiCollege of Ecology, Lishui University, Lishui, 323000, Zhejiang, People's Republic of China.
Fen QiaoCollege of Ecology, Lishui University, Lishui, 323000, Zhejiang, People's Republic of China.
Zhihua LinCollege of Ecology, Lishui University, Lishui, 323000, Zhejiang, People's Republic of China.
Li WeiCollege of Ecology, Lishui University, Lishui, 323000, Zhejiang, People's Republic of China. weiliweili2007@163.com.
Lishui University · CN

Funding

National Natural Science Foundation of China 31901860the Key Research Projects of Lishui City 2021ZDYF05
6 · The paper itself

Abstract

backgroundMicrosatellites are a ubiquitous occurrence in prokaryotic and eukaryotic genomes. Microsatellites have become one of the most popular classes of genetic markers due to their high reproducibility, multi-allelic nature, co-dominant mode of inheritance, abundance and wide genome coverage. We characterised microsatellites in the genomes and genes of two bat species, Pteropus vampyrus and Miniopterus natalensis. This characterisation was used for gene ontology analysis and the Kyoto Encyclopedia of Genes and Genomes pathway enrichment of coding sequences (CDS).

resultsCompared to M. natalensis, the genome size of P. vampyrus is larger and contains more microsatellites, but the total diversity of both species is similar. Mononucleotide and dinucleotide repeats were the most diverse in the genome of the two species. In each bat species, the microsatellite bias was obvious. The microsatellites with the largest number of repeat motifs in P. vampyrus from mononucleotide to hexanucleotide were (A)

conclusionsOur study gives a comparative characterization of the genomes of microsatellites composition in the two bat species. And also allow further study on the effect of microsatellites on gene function as well as provide an insight into the molecular basis for species adaptation to new and changing environments.

Indexed as

ChiropteraAnimalsDinucleotide RepeatsGenome SizeMicrosatellite RepeatsReproducibility of ResultsChiropteraDiversityGenome-wide identificationGO analysisKEGG enrichmentMicrosatellite

Identifiers

PMID36782146
PMCPMC9925362
OpenAlexW4320489462

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.