Evidence map›Paper›PMID 36782118›Full record

ArticleBMC genomic data2023

Role of cytoskeleton-related proteins in the acrosome reaction of Eriocheir sinensis spermatozoa.

Yulian Tang, Lishuang Sun, Shu Li, Huiting Liu, Lvjing Luo, Zhengyu Chen, Genliang Li

Open access · goldAbstract read
In one paragraph

Article in BMC genomic data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yulian TangYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China.
Lishuang SunYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China.
Shu LiYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China.
Huiting LiuYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China.
Lvjing LuoYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China.
Zhengyu ChenYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China.
Genliang LiYoujiang Medical University for Nationalities, Baise, 533000, Guangxi, China. ligenliang@ymun.edu.cn.
Affiliated Hospital of Youjiang Medical University for Nationalities · CN

Funding

Guangxi Graduate Education Innovation Program Teaching Reform Project JGY2020164National Natural Science Foundation of China 31960728
6 · The paper itself

Abstract

Cytoskeleton-related proteins are essential for cell shape maintenance and cytoskeleton remodeling. The spermatozoa of Eriocheir sinensis (Chinese mitten crab) have a unique cellular structure, and the mechanism of spermatozoal metamorphosis during the acrosome reaction is not well understood. In this study, the E. sinensis spermatozoa were induced using calcium ionophore A23187 to undergo the acrosome reaction in vitro, and the acrosome-reacting and fresh (non-reacting) spermatozoa were collected separately. The differential expression of cytoskeleton-related protein genes in acrosome-reacting and fresh spermatozoa of E. sinensis was analyzed by whole transcriptome sequencing and bioinformatics analysis, and PPI network and miRNA-mRNA regulation network were constructed to analyze their possible function and regulation mechanism. The results showed that numerous differentially expressed cytoskeleton-related protein genes, miRNAs and lncRNAs were found in acrosome-reacting and fresh spermatozoa of E. sinensis; 27 cytoskeleton-related protein genes were down regulated and 687 miRNAs were up regulated in acrosome-reacting spermatozoa; 147 miRNAs target these 27 cytoskeleton-related protein genes. In the PPI networks, RAC1, BCAR1, RDX, NCKAP1, EPS8, CDC42BPA, LIMK1, ELMO2, GNAI1 and OCRL were identified as hub proteins. These proteins are mainly involved in the regulation of cytoskeleton organization, actin cytoskeleton organization, microtubule skeleton organization and small GTPase-mediated signal transduction and other biological processes, and play roles in pathways such as actin cytoskeletal regulation and axon guidance. miR-9, miR-31 and two novel miRNAs in the miRNA-mRNA regulatory network are the core miRNAs targeting cytoskeleton-related protein genes. miR-9 targets and regulates OBSCN, CDC42BPA, ELMO2, BCAS3, TPR and OCRL; while miR-31 targets and regulates CDC42BPA and TPR. This study provides a theoretical basis for revealing the mechanism of acrosome reaction under the special spermatozoa morphology of E. sinensis.

Indexed as

Acrosome ReactionBrachyuraCytoskeletal ProteinsMicroRNAsSpermatozoaAnimalsCytoskeletonMaleRNA, MessengerCytoskeletal ProteinsMicroRNAsRNA, MessengerAcrosome reactionCytoskeleton-related proteinEriocheir sinensismiRNASpermatozoa

Identifiers

PMID36782118
PMCPMC9926718
OpenAlexW4320489586

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.