Evidence map›Paper›PMID 36781850›Full record

ArticleNature communications2023

Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia.

Jennifer L Kamens, Stephanie Nance, Cary Koss, Beisi Xu, Anitria Cotton, Jeannie W Lam, Elizabeth A R Garfinkle, Pratima Nallagatla, Amelia M R Smith, Sharnise Mitchell and 23 more

Erratum issued Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT06233526 (Individualized Treatment of Pediatric Relasped and Refractory Acute Myeloid Leukemia Based on Transcriptomic Profile and in Vitro Drug Sensitivity Test), which is not on this map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06233526 naunknown statusnot on this mapstarted 2024, after this paper: background citation

Individualized Treatment of Pediatric Relasped and Refractory Acute Myeloid Leukemia Based on Transcriptomic Profile and in Vitro Drug Sensitivity Test

TypeinterventionalSponsorThe Children's Hospital of Zhejiang University School of MedicineRan2024 to 2025Enrolled60ConditionsAcute Myeloid Leukemia in ChildrenArmsChemotherapy regiments based on the transcriptomic profile and in vitro drug sensitivity test
3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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  13. Overview on Aneuploidy in Childhood B-Cell Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2023
    Review
  14. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors at 6 institutions in 1 country.

Jennifer L KamensDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.
Stephanie NanceDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Cary KossDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Beisi XuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0003-0099-858X
Anitria CottonDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Jeannie W LamDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.
Elizabeth A R GarfinkleThe University of Tennessee Health Science Center, Memphis, TN, USA.
Pratima NallagatlaDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.
Amelia M R SmithDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.
Sharnise MitchellDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Jing MaDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Duane CurrierDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-0123-0233
William C WrightDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Kanisha KavdiaCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Vishwajeeth R PagalaCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Wonil KimDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
LaShanale M WallaceDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Ji-Hoon ChoCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Yiping FanDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Aman SethDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Nathaniel TwarogDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, USA.
John K ChoiDepartment of Pathology, University of Alabama School of Medicine, Birmingham, AL, USA.ORCID http://orcid.org/0000-0002-2861-0180
Esther A ObengDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-8691-7439
Mark E HatleyDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0001-7147-3946
Monika L MetzgerDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-7102-4611
Hiroto InabaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0003-0605-7342
Sima JehaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Jeffrey E RubnitzDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0001-9885-3527
Junmin PengCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0003-0472-7648
Taosheng ChenDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0001-6420-3809
Anang A ShelatDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-6266-2910
R Kiplin GuyDepartment of Pharmaceutical Sciences, University of Kentucky, Lexington, KY, USA.ORCID http://orcid.org/0000-0002-9638-2060
Tanja A GruberDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA. tagruber@stanford.edu.ORCID http://orcid.org/0000-0003-1072-7257
St. Jude Children's Research Hospital · USStanford University · USStanford Medicine · USUniversity of Alabama at Birmingham · USUniversity of Kentucky · USUniversity of Tennessee Health Science Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rearrangments in Histone-lysine-N-methyltransferase 2A (KMT2Ar) are associated with pediatric, adult and therapy-induced acute leukemias. Infants with KMT2Ar acute lymphoblastic leukemia (ALL) have a poor prognosis with an event-free-survival of 38%. Herein we evaluate 1116 FDA approved compounds in primary KMT2Ar infant ALL specimens and identify a sensitivity to proteasome inhibition. Upon exposure to this class of agents, cells demonstrate a depletion of histone H2B monoubiquitination (H2Bub1) and histone H3 lysine 79 dimethylation (H3K79me2) at KMT2A target genes in addition to a downregulation of the KMT2A gene expression signature, providing evidence that it targets the KMT2A transcriptional complex and alters the epigenome. A cohort of relapsed/refractory KMT2Ar patients treated with this approach on a compassionate basis had an overall response rate of 90%. In conclusion, we report on a high throughput drug screen in primary pediatric leukemia specimens whose results translate into clinically meaningful responses. This innovative treatment approach is now being evaluated in a multi-institutional upfront trial for infants with newly diagnosed ALL.

Indexed as

Precursor Cell Lymphoblastic Leukemia-LymphomaProteasome Endopeptidase ComplexAdultChildHumansInfantLysineMyeloid-Lymphoid Leukemia ProteinTranscriptomeLysineMyeloid-Lymphoid Leukemia ProteinProteasome Endopeptidase Complex

Identifiers

PMID36781850
PMCPMC9925443
OpenAlexW4320484982

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.