Evidence map›Paper›PMID 36781843›Full record

ArticleTranslational psychiatry2023

Methylation and expression of glucocorticoid receptor exon-1 variants and FKBP5 in teenage suicide-completers.

Hooriyah S Rizavi, Omar S Khan, Hui Zhang, Runa Bhaumik, Dennis R Grayson, Ghanshyam N Pandey

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  13. SKA2 enhances stress-related glucocorticoid receptor signaling through FKBP4-FKBP5 interactions in neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Review
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  17. Molecular Changes Associated with Suicide.International journal of molecular sciences · 2023
    Review
  18. Biomedicines · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hooriyah S RizaviDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Omar S KhanDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Hui ZhangDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Runa BhaumikDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Dennis R GraysonDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA. Dgrayson@uic.edu.ORCID 0000-0002-4544-5869
Ghanshyam N PandeyDepartment of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
University of Illinois Chicago · US

Funding

Pilot Project Program P50AA022538 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBHASH C. PANDEY · 2015 to 2026
$21.3M
Expression and Methylation of HPA Axis Genes in Adult Suicide BrainR01MH106565 · NIMH · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PANDEY, GHANSHYAM N · 2016 to 2020
$2.7M
NIAAA NIH HHS P50 AA022538NIMH NIH HHS R01 MH106565
6 · The paper itself

Abstract

A dysregulated hypothalamic-pituitary-adrenal (HPA) axis has repeatedly been demonstrated to play a fundamental role in psychiatric disorders and suicide, yet the mechanisms underlying this dysregulation are not clear. Decreased expression of the glucocorticoid receptor (GR) gene, which is also susceptible to epigenetic modulation, is a strong indicator of impaired HPA axis control. In the context of teenage suicide-completers, we have systematically analyzed the 5'UTR of the GR gene to determine the expression levels of all GR exon-1 transcript variants and their epigenetic state. We also measured the expression and the epigenetic state of the FK506-binding protein 51 (FKBP5/FKBP51), an important modulator of GR activity. Furthermore, steady-state DNA methylation levels depend upon the interplay between enzymes that promote DNA methylation and demethylation activities, thus we analyzed DNA methyltransferases (DNMTs), ten-eleven translocation enzymes (TETs), and growth arrest- and DNA-damage-inducible proteins (GADD45). Focusing on both the prefrontal cortex (PFC) and hippocampus, our results show decreased expression in specific GR exon-1 variants and a strong correlation of DNA methylation changes with gene expression in the PFC. FKBP5 expression is also increased in both areas suggesting a decreased GR sensitivity to cortisol binding. We also identified aberrant expression of DNA methylating and demethylating enzymes in both brain regions. These findings enhance our understanding of the complex transcriptional regulation of GR, providing evidence of epigenetically mediated reprogramming of the GR gene, which could lead to possible epigenetic influences that result in lasting modifications underlying an individual's overall HPA axis response and resilience to stress.

Indexed as

DNA MethylationReceptors, GlucocorticoidSuicide, CompletedTacrolimus Binding ProteinsAdolescentExonsGlucocorticoidsHumansHypothalamo-Hypophyseal SystemPituitary-Adrenal SystemTacrolimus Binding Protein 5GlucocorticoidsReceptors, GlucocorticoidTacrolimus Binding Protein 5Tacrolimus Binding Proteins

Identifiers

PMID36781843
PMCPMC9925759
OpenAlexW4320481103

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.