Evidence map›Paper›PMID 36780542›Full record

ArticleNeurogastroenterology and motility2023

Exploration of associations among dietary tryptophan, microbiome composition and function, and symptom severity in irritable bowel syndrome.

Anna M Plantinga, Kendra J Kamp, Qinglong Wu, Li Chen, Linda Yoo, Robert L Burr, Kevin C Cain, Daniel Raftery, Fausto Carnevale Neto, Shyam Badu and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Neurogastroenterology and motility, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Anna M PlantingaDepartment of Mathematics and Statistics, Williams College, Williamstown, Massachusetts, USA.ORCID 0000-0001-6281-7727
Kendra J KampDepartment of Biobehavioral Nursing and Health Informatics, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-7753-3564
Qinglong WuDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Microbiome Center, Houston, Texas, USA.
Li ChenDepartment of Biobehavioral Nursing and Health Informatics, University of Washington, Seattle, Washington, USA.
Linda YooDepartment of Biobehavioral Nursing and Health Informatics, University of Washington, Seattle, Washington, USA.
Robert L BurrDepartment of Biobehavioral Nursing and Health Informatics, University of Washington, Seattle, Washington, USA.
Kevin C CainDepartment of Biobehavioral Nursing and Health Informatics, University of Washington, Seattle, Washington, USA.
Daniel RafteryNorthwest Metabolomics Research Center, Department of Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington, USA.
Fausto Carnevale NetoNorthwest Metabolomics Research Center, Department of Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington, USA.
Shyam BaduDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Microbiome Center, Houston, Texas, USA.
Sik Yu SoDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Microbiome Center, Houston, Texas, USA.
Tor SavidgeDepartment of Pathology and Immunology, Baylor College of Medicine and Texas Children's Microbiome Center, Houston, Texas, USA.
Robert J ShulmanDepartment of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-2385-0991
Margaret M HeitkemperDepartment of Biobehavioral Nursing and Health Informatics, University of Washington, Seattle, Washington, USA.
University of Washington · USBaylor College of Medicine · USUnited States Department of Agriculture · USWilliams College · US

Funding

WIHS DATA MANAGEMENT AND ANALYSIS CENTER(WDMAC)U01AI042590 · NIAID · JOHNS HOPKINS UNIVERSITY · PI GANGE, STEPHEN J, GOLUB, ELIZABETH T · 1998 to 2018
$38.4M
PILOT STUDY--CLINICAL NUTRITION RESEARCHP30DK035816 · NIDDK · UNIVERSITY OF WASHINGTON · PI GREGORY J MORTON · 1986 to 2026
$30.4M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Hashem B El-Serag · 2001 to 2026
$28.3M
Project 3: Functional Microbiome and Host Signatures in Transition from Commensal to pathogenP01AI152999 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI HAAG, ANTHONY · 2020 to 2025
$12.0M
Decoding Antibiotic-induced Susceptibility to Clostridium difficile InfectionU01AI124290 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BRITTON, ROBERT A, GAREY, KEVIN W · 2016 to 2020
$7.9M
MICROENVIRONMENT IN ENTERIC NEURON DEVELOPMENTR01NS015547 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GERSHON, MICHAEL D, MARGOLIS, KARA GROSS · 1985 to 2022
$7.2M
PATHWAYS TO NEW BIOMARKERS IN RECURRENT ABDOMINAL PAIN IN CHILDRENR01NR013497 · NINR · BAYLOR COLLEGE OF MEDICINE · PI SAVIDGE, TOR C. · 2012 to 2024
$4.7M
Omics and Symptom Science Training ProgramT32NR016913 · NINR · UNIVERSITY OF WASHINGTON · PI CYNTHIA M DOUGHERTY, Margaret McLean Heitkemper · 2017 to 2026
$3.2M
A Prospective Study Examining the Role of Gestational SSRI Exposure in the Development of Functional Gastrointestinal DisordersR01DK130517 · NIDDK · NEW YORK UNIVERSITY · PI MARGOLIS, KARA GROSS, SAVIDGE, TOR C. · 2021 to 2024
$2.5M
Microbiome and Pain SupplementR01NR014479 · NINR · UNIVERSITY OF WASHINGTON · PI HEITKEMPER, MARGARET MCLEAN, SHULMAN, ROBERT J · 2014 to 2017
$1.8M
POR Program on Genomic Prediction of Antimicrobial Resistance in VREK24AI121296 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ARIAS, CESAR AUGUSTO · 2016 to 2025
$1.5M
A Comprehensive Self-Management Intervention for individuals with Inflammatory Bowel DiseaseK23NR020044 · NINR · UNIVERSITY OF WASHINGTON · PI KAMP, KENDRA JOY · 2022 to 2024
$430k
NIAID NIH HHS K24 AI121296NIAID NIH HHS P01 AI152999NIAID NIH HHS U01 AI042590NIAID NIH HHS U01 AI124290NIDDK NIH HHS P30 DK035816NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK130517NINDS NIH HHS R01 NS015547NINR NIH HHS K23 NR020044NINR NIH HHS R01 NR013497NINR NIH HHS R01 NR014479NINR NIH HHS T32 NR016913
6 · The paper itself

Abstract

backgroundImbalance of the tryptophan (TRP) pathway may influence symptoms among patients with irritable bowel syndrome (IBS). This study explored relationships among different components that contribute to TRP metabolism (dietary intake, stool metabolite levels, predicted microbiome metabolic capability) in females with IBS and healthy controls (HCs). Within the IBS group, we also investigated relationships between TRP metabolic determinants, Bifidobacterium abundance, and symptoms of IBS.

methodsParticipants with IBS (Rome III) and HCs completed a 28-day diary of gastrointestinal symptoms and a 3-day food record for TRP intake. They provided a stool sample for shotgun metagenomics, 16 S rRNA analyses, and quantitative measurement of TRP by mass spectrometry.

resultsOur cohort included 115 females, 69 with IBS and 46 HCs, with a mean age of 28.5 years (SD 7.4). TRP intake (p = 0.71) and stool TRP level (p = 0.27) did not differ between IBS and HC. Bifidobacterium abundance was lower in the IBS group than in HCs (p = 0.004). Predicted TRP metabolism gene content was higher in IBS than HCs (FDR-corrected q = 0.006), whereas predicted biosynthesis gene content was lower (q = 0.045). Within the IBS group, there was no association between symptom severity and TRP intake or stool TRP, but there was a significant interaction between Bifidobacterium abundance and TRP intake (q = 0.029) in predicting stool character.

conclusionsDietary TRP intake, microbiome composition, and differences in TRP metabolism constitute a complex interplay of factors that could modulate IBS symptom severity.

Indexed as

Gastrointestinal MicrobiomeIrritable Bowel SyndromeMicrobiotaAdultDietFemaleHumansTryptophanTryptophandietgastrointestinal microbiomeirritable bowel syndrometryptophan

Identifiers

PMID36780542
PMCPMC10953042
OpenAlexW4320483589

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.