Evidence map›Paper›PMID 36779416›Full record

ArticleJournal of cell science2023

The ecl family gene ecl3+ is induced by phosphate starvation and contributes to sexual differentiation in fission yeast.

Hokuto Ohtsuka, Hiroki Sakata, Yuto Kitazaki, Masanobu Tada, Takafumi Shimasaki, Yoko Otsubo, Yasukichi Maekawa, Mikuto Kobayashi, Kazuki Imada, Akira Yamashita and 1 more

Open access · hybridFull text read
In one paragraph

Article in Journal of cell science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Hokuto OhtsukaLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.ORCID 0000-0001-7843-2602
Hiroki SakataLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.
Yuto KitazakiLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.
Masanobu TadaLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.
Takafumi ShimasakiLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.ORCID 0000-0003-2558-9395
Yoko OtsuboInterdisciplinary Research Unit, National Institute for Basic Biology, Okazaki, Aichi 444-858, Japan.ORCID 0000-0002-2401-4808
Yasukichi MaekawaLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.
Mikuto KobayashiLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.
Kazuki ImadaDepartment of Chemistry and Biochemistry, National Institute of Technology (KOSEN), Suzuka College, Suzuka 510-0294, Japan.ORCID 0000-0002-9894-6579
Akira YamashitaInterdisciplinary Research Unit, National Institute for Basic Biology, Okazaki, Aichi 444-858, Japan.ORCID 0000-0002-1805-1434
Hirofumi AibaLaboratory of Molecular Microbiology, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Aichi 464-8601, Japan.ORCID 0000-0002-7775-0446
Nagoya University · JPNational Institute for Basic Biology · JPOsaka City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Schizosaccharomyces pombe, ecl family genes are induced by several signals, such as starvation of various nutrients, including sulfur, amino acids and Mg2+, and environmental stress, including heat or oxidative stress. These genes mediate appropriate cellular responses and contribute to the maintenance of cell viability and induction of sexual differentiation. Although this yeast has three ecl family genes with overlapping functions, any environmental conditions that induce ecl3+ remain unidentified. We demonstrate that ecl3+ is induced by phosphate starvation, similar to its chromosomally neighboring genes, pho1+ and pho84+, which respectively encode an extracellular acid phosphatase and an inorganic phosphate transporter. ecl3+ expression was induced by the transcription factor Pho7 and affected by the cyclin-dependent kinase (CDK)-activating kinase Csk1. Phosphate starvation induced G1 arrest and sexual differentiation via ecl family genes. Biochemical analyses suggested that this G1 arrest was mediated by the stabilization of the CDK inhibitor Rum1, which was dependent on ecl family genes. This study shows that ecl family genes are required for appropriate responses to phosphate starvation and provides novel insights into the diversity and similarity of starvation responses.

Indexed as

SchizosaccharomycesSchizosaccharomyces pombe ProteinsGene Expression Regulation, FungalPhosphatesSex DifferentiationTranscription FactorsPhosphatesSchizosaccharomyces pombe ProteinsTranscription Factorsecl family genesFission yeastG1 cell cycle arrestLifespanPhosphate signal transduction pathwayPhosphate starvationSexual differentiation

Identifiers

PMID36779416
PMCPMC10038150
OpenAlexW4320496831

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read27
identifiers read1
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.