Evidence map›Paper›PMID 36778142›Full record

ArticlePeerJ2023

Construction and validation of a fatty acid metabolism-related gene signature for predicting prognosis and therapeutic response in patients with prostate cancer.

Hongjun Zhao, Tong Wu, Zehao Luo, Qinyao Huang, Sihua Zhu, Chunling Li, Zubing Zhang, Jiahao Zhang, Jianwen Zeng, Yuying Zhang

Abstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hongjun ZhaoDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Tong WuDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Zehao LuoDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Qinyao HuangDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Sihua ZhuDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Chunling LiDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Zubing ZhangDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Jiahao ZhangDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Jianwen ZengDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, China.
Yuying ZhangShenzhen Longhua Maternity and Child Healthcare Hospital, Shenzhen, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Reprogramming of fatty acid metabolism is a newly-identified hallmark of malignancy. However, no studies have systematically investigated the fatty acid metabolism related-gene set in prostate cancer (PCa). Methods: A cohort of 381 patients with gene expression and clinical data from The Cancer Genome Atlas was used as the training set, while another cohort of 90 patients with PCa from GEO (GSE70769) was used as the validation set. Differentially expressed fatty acid metabolism-related genes were subjected to least absolute shrinkage and selection operator (LASSO)-Cox regression to establish a fatty acid metabolism-related risk score. Associations between the risk score and clinical characteristics, immune cell infiltration, tumor mutation burden (TMB), tumor immune dysfunction and exclusion (TIDE) score, and response to chemotherapy were analyzed. Finally, the expression level of genes included in the model was validated using real-time PCR. Results: A prognostic risk model based on five fatty acid metabolism related genes ( Conclusion: This study established a fatty acid metabolism-related gene signature which was predictive of BCR and response to chemotherapy and immunotherapy, providing a novel therapeutic biomarker for PCa.

Indexed as

Prostatic NeoplasmsDocetaxelFatty AcidsHumansLipid MetabolismMalePrognosisDocetaxelFatty AcidsFatty acid metabolismPrognosisProstate cancerTumorigenesis

Identifiers

PMID36778142
PMCPMC9910187

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.