Evidence map›Paper›PMID 36778052›Full record

ArticleCell genomics2022

Expanding the genomic encyclopedia of

Rekha Seshadri, Simon Roux, Katharina J Huber, Dongying Wu, Sora Yu, Dan Udwary, Lee Call, Stephen Nayfach, Richard L Hahnke, Rüdiger Pukall and 30 more

Abstract read
In one paragraph

Article in Cell genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Genome sequences of sevenMicrobiology resource announcements · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. International journal of systematic and evolutionary microbiology · 2026
    Article
  8. Article
  9. Genome sequence ofMicrobiology resource announcements · 2025
    Article
  10. Article
  11. Why Do FilamentousAnnual review of microbiology · 2025
    Review
  12. Article
  13. Genome sequence ofMicrobiology resource announcements · 2025
    Article
  14. mBio · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors.

Rekha SeshadriUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Simon RouxUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Katharina J HuberLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Dongying WuUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Sora YuEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Dan UdwaryUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Lee CallUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Stephen NayfachUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Richard L HahnkeLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Rüdiger PukallLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
James R WhiteResphera Biosciences, Baltimore, MD, USA.
Neha J VargheseUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Cody WebbUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Krishnaveni PalaniappanUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Lorenz C ReimerLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Joaquim SardàLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Jonathon BertschUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Supratim MukherjeeUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
T B K ReddyUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Patrick P HajekUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Marcel HuntemannUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
I-Min A ChenUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Alex SpundeUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Alicia ClumUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Nicole ShapiroUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Zong-Yen WuEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Zhiying ZhaoUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Yuguang ZhouChina General Microbiological Culture Collection Center, Beijing, China.
Lyudmila EvtushenkoPushchino Scientific Center for Biological Research of the Russian Academy of Sciences, All-Russian Collection of Microorganisms (VKM), Pushchino, Russia.
Sofie ThijsCenter for Environmental Sciences, Environmental Biology, Hasselt University, Diepenbeek, Belgium.
Vincent StevensCenter for Environmental Sciences, Environmental Biology, Hasselt University, Diepenbeek, Belgium.
Emiley A Eloe-FadroshUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Nigel J MounceyUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Yasuo YoshikuniUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
William B WhitmanDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Hans-Peter KlenkSchool of Biology, Newcastle University, Newcastle upon Tyne, UK.
Tanja WoykeUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Markus GökerLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Nikos C KyrpidesUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.
Natalia N IvanovaUS Department of Energy Joint Genome Institute, Berkeley, CA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phylum

Indexed as

actinobacteriacomparative genomicsecologyevolutionmetagenomicsmicrobiologymycobacteriasecondary metabolites

Identifiers

PMID36778052
PMCPMC9903846

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.