Evidence map›Paper›PMID 36777533›Full record

ArticleFrontiers in plant science2022

Rhamnogalacturonan-I as a nematode chemoattractant from

Morihiro Oota, Syuuto Toyoda, Toshihisa Kotake, Naoki Wada, Masatsugu Hashiguchi, Ryo Akashi, Hayato Ishikawa, Bruno Favery, Allen Yi-Lun Tsai, Shinichiro Sawa

Abstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Morihiro OotaFaculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Syuuto ToyodaFaculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Toshihisa KotakeDivision of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.
Naoki WadaFaculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Masatsugu HashiguchiFaculty of Regional Innovation, University of Miyazaki, Miyazaki, Japan.
Ryo AkashiFaculty of Agriculture, University of Miyazaki, Miyazaki, Japan.
Hayato IshikawaGraduate School of Pharmaceutical Sciences, Chiba University, Chiba, Japan.
Bruno FaveryInstitut national de recherche pour l'agriculture, l'alimentation et l'environnement (INRAE), Université Côte d'Azur, CNRS, UMR 1355-7254 Institut Sophia Agrobiotech, Sophia Antipolis, France.
Allen Yi-Lun TsaiFaculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Shinichiro SawaFaculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The soil houses a tremendous amount of micro-organisms, many of which are plant parasites and pathogens by feeding off plant roots for sustenance. Such root pathogens and parasites often rely on plant-secreted signaling molecules in the rhizosphere as host guidance cues. Here we describe the isolation and characterization of a chemoattractant of plant-parasitic root-knot nematodes ( Methods: The Super-growing Root (SR) culture, consisting of excised roots from the legume species Results: Monosaccharide analyses suggest the chemo-attractant contains a wide array of sugars, but is enriched in arabinose, galactose and galacturonic acid. This purified chemoattractant was shown to contain pectin, specifically anti-rhamnogalacturonan-I and anti-arabinogalactan protein epitopes but not anti-homogalacturonan epitopes. More importantly, the arabinose and galactose sidechain groups were found to be essential for RKN-attracting activities. This chemo-attractant appears to be specific to Discussion: This is the first report to identify the nematode attractant purified from root exudate of

Indexed as

chemotaxisLotus corniculatus L.pectinroot-knot nematodes (Meloidogyne incognita)super roots

Identifiers

PMID36777533
PMCPMC9908596

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.