Evidence map›Paper›PMID 36777021›Full record

ArticleFrontiers in microbiology2022

Suad Algarni, Jing Han, Dereje D Gudeta, Bijay K Khajanchi, Steven C Ricke, Young Min Kwon, Douglas D Rhoads, Steven L Foley

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Occurrence and characterization of plasmids carryingFrontiers in cellular and infection microbiology · 2023
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Suad AlgarniDivision of Microbiology, National Center for Toxicological Research, Food and Drug Administration, Jefferson, AR, United States.
Jing HanDivision of Microbiology, National Center for Toxicological Research, Food and Drug Administration, Jefferson, AR, United States.
Dereje D GudetaDivision of Microbiology, National Center for Toxicological Research, Food and Drug Administration, Jefferson, AR, United States.
Bijay K KhajanchiDivision of Microbiology, National Center for Toxicological Research, Food and Drug Administration, Jefferson, AR, United States.
Steven C RickeMeat Science & Animal Biologics Discovery Program and Department of Animal and Dairy Sciences, University of Wisconsin, Madison, WI, United States.
Young Min KwonCell and Molecular Biology Program, University of Arkansas, Fayetteville, AR, United States.
Douglas D RhoadsCell and Molecular Biology Program, University of Arkansas, Fayetteville, AR, United States.
Steven L FoleyDivision of Microbiology, National Center for Toxicological Research, Food and Drug Administration, Jefferson, AR, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The antimicrobial resistance (AMR) mobilome plays a key role in the dissemination of resistance genes encoded by mobile genetics elements (MGEs) including plasmids, transposons (Tns), and insertion sequences (ISs). These MGEs contribute to the dissemination of multidrug resistance (MDR) in enteric bacterial pathogens which have been considered as a global public health risk. Methods: To further understand the diversity and distribution of AMR genes and MGEs across different plasmid types, we utilized multiple sequence-based computational approaches to evaluate AMR-associated plasmid genetics. A collection of 1,309 complete plasmid sequences from Gammaproteobacterial species, including 100 plasmids from each of the following 14 incompatibility (Inc) types: A/C, BO, FIA, FIB, FIC, FIIA, HI1, HI2, I1, K, M, N, P except W, where only 9 sequences were available, was extracted from the National Center for Biotechnology Information (NCBI) GenBank database using BLAST tools. The extracted FASTA files were analyzed using the AMRFinderPlus web-based tools to detect antimicrobial, disinfectant, biocide, and heavy metal resistance genes and ISFinder to identify IS/Tn MGEs within the plasmid sequences. Results and Discussion:

Indexed as

antimicrobial resistancedisinfectant resistanceEnterobacteriaceaemetal resistancemobile genetic elementsplasmids

Identifiers

PMID36777021
PMCPMC9908598

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.