Evidence map›Paper›PMID 36773205›Full record

ArticleJournal of assisted reproduction and genetics2023

Blocker displacement amplification-based genetic diagnosis for autosomal dominant polycystic kidney disease and the clinical outcomes of preimplantation genetic testing.

Tingting Lin, Junfeng Luo, Haibing Yu, Bohao Dong, Qi Zhang, Wei Zhang, Ke Chen, Yezhou Xiang, Dongyun Liu, Guoning Huang

Open access · hybridAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Tingting LinCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Junfeng LuoNuProbe China, Shanghai, China.
Haibing YuCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Bohao DongNuProbe China, Shanghai, China.
Qi ZhangCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Wei ZhangAmCare Genomics Lab, Guangzhou, China.
Ke ChenCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Yezhou XiangCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China.
Dongyun LiuCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China. dongyunliu@163.com.
Guoning HuangCenter for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University, Chongqing, China. gnhuang217@sina.com.ORCID http://orcid.org/0000-0003-0196-3709
Children's Hospital of Chongqing Medical University · CNChongqing Maternal and Child Health Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveGiven that the molecular diagnosis of autosomal dominant polycystic kidney disease (ADPKD) is complicated, we aim to apply blocker displacement amplification (BDA) on the mutational screening of PKD1 and PKD2.

methodsA total of 35 unrelated families with ADPKD were recruited from the Center for Reproductive Medicine, Women and Children's Hospital of Chongqing Medical University (Chongqing, China), from October 2018 to October 2021. Long-range PCR followed by next-generation sequencing were applied for resequencing of PKD1 and PKD2, and the putatively disease-causative variants were verified with BDA. The effects of ADPKD on male and female infertility and the factors influencing the clinical outcomes of preimplantation genetic testing (PGT) for ADPKD were investigated.

resultsA total of 26 PKD1 variants and 5 PKD2 variants were identified, of which 13 were newly discovered. The BDA system worked effectively for eliminating the interference of pseudogenes in genetic testing of PKD1 (1-33 exons) with different concentrations of genome DNA. The females with ADPKD have no specific infertility factors, while 68.2% of the affected men were with abnormal sperm concentration and/or motility with an indefinite genotype-phenotype relationship. As for PGT, the fertilization rate of couples with the male partner having ADPKD was relatively lower compared to those with the female partner being affected. The ADPKD patients receiving PGT usually achieved high rates of live births.

conclusionThese findings expanded the variant spectrum of PKD genes and emphasized the application prospect of blocker displacement amplification on PKD1-related genetic diagnosis.

Indexed as

Polycystic Kidney, Autosomal DominantDNA Mutational AnalysisFemaleGenetic TestingHumansMaleMutationSemenTRPP Cation ChannelsTRPP Cation ChannelsADPKDBlocker displacement amplificationPKD1PKD2Preimplantation genetic testing

Identifiers

PMID36773205
PMCPMC10224877
OpenAlexW4320033114

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.