Evidence map›Paper›PMID 36772915›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2023

Real-time intelligent classification of COVID-19 and thrombosis via massive image-based analysis of platelet aggregates.

Chenqi Zhang, Maik Herbig, Yuqi Zhou, Masako Nishikawa, Mohammad Shifat-E-Rabbi, Hiroshi Kanno, Ruoxi Yang, Yuma Ibayashi, Ting-Hui Xiao, Gustavo K Rohde and 5 more

Abstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Linear Optimal Transport Subspaces for Point Set Classification.Journal of mathematical imaging and vision · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Quantifying Nuclear Structures of Digital Pathology Images Across Cancers Using Transport-Based Morphometry.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Chenqi ZhangDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.
Maik HerbigDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.ORCID 0000-0001-7592-7829
Yuqi ZhouDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-1206-0049
Masako NishikawaDepartment of Clinical Laboratory, University of Tokyo Hospital, Tokyo, Japan.
Mohammad Shifat-E-RabbiDepartment of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, USA.
Hiroshi KannoDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.
Ruoxi YangDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.
Yuma IbayashiDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.
Ting-Hui XiaoDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-7339-152X
Gustavo K RohdeDepartment of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, USA.
Masataka SatoDepartment of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan.
Satoshi KoderaDepartment of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan.
Masao DaimonDepartment of Clinical Laboratory, University of Tokyo Hospital, Tokyo, Japan.
Yutaka YatomiDepartment of Clinical Laboratory, University of Tokyo Hospital, Tokyo, Japan.
Keisuke GodaDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.

Funding

Transport transforms for biomedical data modeling, estimation, and classificationR01GM130825 · NIGMS · UNIVERSITY OF VIRGINIA · PI Gustavo Kunde Rohde · 2019 to 2026
$2.8M
NIGMS NIH HHS R01 GM130825
6 · The paper itself

Abstract

Microvascular thrombosis is a typical symptom of COVID-19 and shows similarities to thrombosis. Using a microfluidic imaging flow cytometer, we measured the blood of 181 COVID-19 samples and 101 non-COVID-19 thrombosis samples, resulting in a total of 6.3 million bright-field images. We trained a convolutional neural network to distinguish single platelets, platelet aggregates, and white blood cells and performed classical image analysis for each subpopulation individually. Based on derived single-cell features for each population, we trained machine learning models for classification between COVID-19 and non-COVID-19 thrombosis, resulting in a patient testing accuracy of 75%. This result indicates that platelet formation differs between COVID-19 and non-COVID-19 thrombosis. All analysis steps were optimized for efficiency and implemented in an easy-to-use plugin for the image viewer napari, allowing the entire analysis to be performed within seconds on mid-range computers, which could be used for real-time diagnosis.

Indexed as

COVID-19ThrombosisBlood PlateletsHumansImage Processing, Computer-AssistedNeural Networks, Computer

Identifiers

PMID36772915
PMCPMC11331588

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.