Evidence map›Paper›PMID 36770420›Full record

ArticleNanomaterials (Basel, Switzerland)2023

Towards Unbiased Fluorophore Counting in Superresolution Fluorescence Microscopy.

Oskar Laitenberger, Timo Aspelmeier, Thomas Staudt, Claudia Geisler, Axel Munk, Alexander Egner

Abstract read
In one paragraph

Article in Nanomaterials (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. An Overview of Supramolecular Platforms Boosting Drug Delivery.Bioinorganic chemistry and applications · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Oskar LaitenbergerDepartment of Optical Nanoscopy, Institut für Nanophotonik e.V., 37077 Göttingen, Germany.
Timo AspelmeierInstitute for Mathematical Stochastics, Georg-August-University of Göttingen, 37073 Göttingen, Germany.
Thomas StaudtInstitute for Mathematical Stochastics, Georg-August-University of Göttingen, 37073 Göttingen, Germany.
Claudia GeislerDepartment of Optical Nanoscopy, Institut für Nanophotonik e.V., 37077 Göttingen, Germany.
Axel MunkInstitute for Mathematical Stochastics, Georg-August-University of Göttingen, 37073 Göttingen, Germany.ORCID 0000-0002-9181-9331
Alexander EgnerDepartment of Optical Nanoscopy, Institut für Nanophotonik e.V., 37077 Göttingen, Germany.ORCID 0000-0001-5248-3858

Funding

Deutsche Forschungsgemeinschaft SFB 755
6 · The paper itself

Abstract

With the advent of fluorescence superresolution microscopy, nano-sized structures can be imaged with a previously unprecedented accuracy. Therefore, it is rapidly gaining importance as an analytical tool in the life sciences and beyond. However, the images obtained so far lack an absolute scale in terms of fluorophore numbers. Here, we use, for the first time, a detailed statistical model of the temporal imaging process which relies on a hidden Markov model operating on two timescales. This allows us to extract this information from the raw data without additional calibration measurements. We show this on the basis of added data from experiments on single Alexa 647 molecules as well as GSDIM/dSTORM measurements on DNA origami structures with a known number of labeling positions.

Indexed as

fluorescence microscopyGSDIMnanoscale characterizationquantitative imagingSTORMsuper-resolution imaging

Identifiers

PMID36770420
PMCPMC9921631

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.