Evidence map›Paper›PMID 36769080›Full record

ArticleInternational journal of molecular sciences2023

Validation of the Reference Genes for Expression Analysis in the Hippocampus after Transient Ischemia/Reperfusion Injury in Gerbil Brain.

Anita Lewczuk, Anna Boratyńska-Jasińska, Barbara Zabłocka

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Transient Intraperitoneal Residence ofPathogens (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Heliyon · 2024
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anita LewczukMossakowski Medical Research Institute, Polish Academy of Science, 02-106 Warsaw, Poland.
Anna Boratyńska-JasińskaMossakowski Medical Research Institute, Polish Academy of Science, 02-106 Warsaw, Poland.ORCID 0000-0003-1337-3175
Barbara ZabłockaMossakowski Medical Research Institute, Polish Academy of Science, 02-106 Warsaw, Poland.ORCID 0000-0003-3116-7295

Funding

Mossakowski Medical Research Institute FBW-18 (A.L.)POWER Och!DOK, POWR. 03.02.00-00-I028/17-00 (A.L.)statutory Mossakowski Medical Research Institute funding (B.Z.) theme 10
6 · The paper itself

Abstract

Transient brain ischemia in gerbils is a common model to study the mechanisms of neuronal changes in the hippocampus. In cornu ammonnis 2-3, dentate gyrus (CA2-3,DG) regions of the hippocampus, neurons are resistant to 5-min ischemia/reperfusion (I/R) insult, while cornu ammonnis 1 (CA1) is found to be I/R-vulnerable. The quantitative polymerase chain reaction (qRT-PCR) is widely used to study the expression of genes involved in these phenomena. It requires stable and reliable genes for normalization, which is crucial for comparable and reproducible analyses of expression changes of the genes of interest. The aim of this study was to determine the best housekeeping gene for the I/R gerbil model in two parts of the hippocampus in controls and at 3, 48, and 72 h after recanalization. We selected and tested six reference genes frequently used in central nervous system studies:

Indexed as

Gene Expression ProfilingReperfusion InjuryAnimalsBrainGerbillinaeHippocampusReal-Time Polymerase Chain ReactionReference Standardsbrain ischemiahippocampusmRNA expressionreference genes

Identifiers

PMID36769080
PMCPMC9917415

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.