Evidence map›Paper›PMID 36768929›Full record

ReviewInternational journal of molecular sciences2023

Transposable Elements Co-Option in Genome Evolution and Gene Regulation.

Erica Gasparotto, Filippo Vittorio Burattin, Valeria Di Gioia, Michele Panepuccia, Valeria Ranzani, Federica Marasca, Beatrice Bodega

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. AcutebioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Special Issue "Repetitive DNA".International journal of molecular sciences · 2026
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. HLA Genetics for the Human Diseases.Advances in experimental medicine and biology · 2024
    Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Erica GasparottoFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.ORCID 0000-0003-0151-5906
Filippo Vittorio BurattinFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.
Valeria Di GioiaFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.ORCID 0000-0002-6074-0831
Michele PanepucciaFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.ORCID 0000-0003-2905-8815
Valeria RanzaniFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.ORCID 0000-0002-0602-5335
Federica MarascaFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.
Beatrice BodegaFondazione INGM, Istituto Nazionale di Genetica Molecolare "Enrica e Romeo Invernizzi", 20122 Milan, Italy.ORCID 0000-0003-0527-9234

Funding

Fondazione Cariplo 2019-3416Fondazione Regionale per la Ricerca Biomedica FRRB CP2_12/2018Italian Association for Cancer Research IG 2022 27066
6 · The paper itself

Abstract

The genome is no longer deemed as a fixed and inert item but rather as a moldable matter that is continuously evolving and adapting. Within this frame, Transposable Elements (TEs), ubiquitous, mobile, repetitive elements, are considered an alive portion of the genomes to date, whose functions, although long considered "dark", are now coming to light. Here we will review that, besides the detrimental effects that TE mobilization can induce, TEs have shaped genomes in their current form, promoting genome sizing, genomic rearrangements and shuffling of DNA sequences. Although TEs are mostly represented in the genomes by evolutionarily old, short, degenerated, and sedentary fossils, they have been thoroughly co-opted by the hosts as a prolific and original source of regulatory instruments for the control of gene transcription and genome organization in the nuclear space. For these reasons, the deregulation of TE expression and/or activity is implicated in the onset and progression of several diseases. It is likely that we have just revealed the outermost layers of TE functions. Further studies on this portion of the genome are required to unlock novel regulatory functions that could also be exploited for diagnostic and therapeutic approaches.

Indexed as

DNA Transposable ElementsGene Expression RegulationEvolution, MolecularGenome SizeReading FramesDNA Transposable ElementsDNA evolutiongene regulationretrotranspositionTE de-regulation in diseasestransposable elements

Identifiers

PMID36768929
PMCPMC9917352

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.