Evidence map›Paper›PMID 36768706›Full record

ArticleInternational journal of molecular sciences2023

Obtaining miRNA from Saliva-Comparison of Sampling and Purification Methods.

Aintzane Urbizu, Laura Arnaldo, Katrin Beyer

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Aintzane UrbizuDepartment of Pathology, Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Spain.ORCID 0000-0001-8458-1209
Laura ArnaldoDepartment of Pathology, Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Spain.ORCID 0000-0003-1654-0573
Katrin BeyerDepartment of Pathology, Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Spain.ORCID 0000-0001-8905-1514

Funding

Ministry of Science and Innovation, Spain PI18/00276Ministry of Science and Innovation, Spain PI21/00833
6 · The paper itself

Abstract

The use of saliva as a biomarker source has advantages over other biofluids and imaging techniques, and miRNAs are ideal biomarker candidates. They are involved in numerous cellular processes, and their altered expression suggests that miRNAs play a crucial regulatory role in disease development. We wanted to find an easily reproducible and executable miRNA-obtaining methodology suitable for quantification. Three commercial miRNA extraction kits (mirVana, Nucleospin and miRNeasy) and three saliva collectors (50 mL tubes, Salimetrics and Oragene) were tested. Several features, including RNA quality and technical parameters, were evaluated. The expression of five synthetic spike-in controls and seven saliva-miRNAs was analyzed independently and grouped by the collectors and the extraction kits. The combination of Oragene and miRNeasy assured the most sensitive detection of all seven saliva miRNAs. Testing different combinations of saliva collectors and RNA purification kits permitted the establishment of combinations for different uses. The results of our study highlight that optimization of resources for biomarker studies is possible after careful planning of each study.

Indexed as

MicroRNAsBiomarkersSalivaSpecimen HandlingBiomarkersMicroRNAsmiRNA quantificationmiRNAspurification methodssaliva biomarker

Identifiers

PMID36768706
PMCPMC9916721

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.