Evidence map›Paper›PMID 36765719›Full record

ArticleCancers2023

Region Segmentation of Whole-Slide Images for Analyzing Histological Differentiation of Prostate Adenocarcinoma Using Ensemble EfficientNetB2 U-Net with Transfer Learning Mechanism.

Kobiljon Ikromjanov, Subrata Bhattacharjee, Rashadul Islam Sumon, Yeong-Byn Hwang, Hafizur Rahman, Myung-Jae Lee, Hee-Cheol Kim, Eunhyang Park, Nam-Hoon Cho, Heung-Kook Choi

Abstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Toward confident prostate cancer detection using ultrasound: a multi-center study.International journal of computer assisted radiology and surgery · 2024
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kobiljon IkromjanovDepartment of Digital Anti-Aging Healthcare, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.
Subrata BhattacharjeeDepartment of Computer Engineering, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.ORCID 0000-0002-6036-6915
Rashadul Islam SumonDepartment of Digital Anti-Aging Healthcare, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.
Yeong-Byn HwangDepartment of Digital Anti-Aging Healthcare, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.
Hafizur RahmanDepartment of Digital Anti-Aging Healthcare, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.
Myung-Jae LeeJLK Artificial Intelligence R&D Center, Seoul 06141, Republic of Korea.
Hee-Cheol KimDepartment of Digital Anti-Aging Healthcare, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.
Eunhyang ParkDepartment of Pathology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Nam-Hoon ChoDepartment of Pathology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.ORCID 0000-0002-0045-6441
Heung-Kook ChoiDepartment of Computer Engineering, u-AHRC, Inje University, Gimhae 50834, Republic of Korea.ORCID 0000-0002-1372-7052

Funding

Korea Health Industry Development Institute HI21C0977National Research Foundation of Korea 2021R1A2C2008576
6 · The paper itself

Abstract

Recent advances in computer-aided detection via deep learning (DL) now allow for prostate cancer to be detected automatically and recognized with extremely high accuracy, much like other medical diagnoses and prognoses. However, researchers are still limited by the Gleason scoring system. The histopathological analysis involved in assigning the appropriate score is a rigorous, time-consuming manual process that is constrained by the quality of the material and the pathologist's level of expertise. In this research, we implemented a DL model using transfer learning on a set of histopathological images to segment cancerous and noncancerous areas in whole-slide images (WSIs). In this approach, the proposed Ensemble U-net model was applied for the segmentation of stroma, cancerous, and benign areas. The WSI dataset of prostate cancer was collected from the Kaggle repository, which is publicly available online. A total of 1000 WSIs were used for region segmentation. From this, 8100 patch images were used for training, and 900 for testing. The proposed model demonstrated an average dice coefficient (DC), intersection over union (IoU), and Hausdorff distance of 0.891, 0.811, and 15.9, respectively, on the test set, with corresponding masks of patch images. The manipulation of the proposed segmentation model improves the ability of the pathologist to predict disease outcomes, thus enhancing treatment efficacy by isolating the cancerous regions in WSIs.

Indexed as

deep learninghistologicalprostate adenocarcinomasegmentationtransfer learningU-Net

Identifiers

PMID36765719
PMCPMC9913745

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.