ArticleFrontiers in veterinary science2023
A multi gene-approach genotyping method identifies 24 genetic clusters within the genotype II-European African swine fever viruses circulating from 2007 to 2022.
Article in Frontiers in veterinary science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.
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48 citing papers in PubMed, 53 citations in OpenAlex.
- Current Insights into the Epidemiology and Transmission Dynamics of African Swine Fever Virus and Future Control Perspectives.Pathogens (Basel, Switzerland) · 2026Review
- Comprehensive molecular profiling of the African swine fever virus in Korean wild boars between 2019 and 2024.Veterinary research · 2026Article
- Epidemiological analysis of African swine fever in the European Union during 2025.EFSA journal. European Food Safety Authority · 2026Article
- Characterization of African swine fever outbreaks in Hong Kong SAR, winter 2023 to 2024.Microbiology spectrum · 2026Article
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- First Evidence of Porcine Epidemic Diarrhoea Virus and African Swine Fever Virus Natural Co-Infection in Pigs from Karnataka, India: An Epidemiological Investigation.Current microbiology · 2026Article
- Molecular characterization of genotype II African swine fever virus circulating in three provinces of Indonesia, 2021-2023.Veterinary world · 2026Article
- Emergence of African Swine Fever in Sri Lanka, 2024.Viruses · 2026Article
- Subtle Genetic Shifts of African Swine Fever Virus Among Vietnamese Domestic Swine Following Live-Attenuated Vaccine Commercialization.Transboundary and emerging diseases · 2026Article
- A phylogenetic contribution to understanding the panzootic spread of African swine fever: from the global to the local scale.Virus evolution · 2026Article
- Article
- Endemic Circulation of Cluster 19 African Swine Fever Virus in Serbia and Bosnia and Herzegovina.Veterinary sciences · 2025Article
- Detection of the intergenic region III and multigene family 505 9R and 10R-V variant of African swine fever virus genotype II on pig farms in South Korea.Archives of virology · 2025Article
- Genetic variations of African swine fever virus MGF 505-9R/10R and I73R/I329L intergenic regions: their role in differentiation between recombinant variant and genotype I and II isolates.Archives of virology · 2025Article
- Six-year surveillance of African Swine Fever in pigs and wild boars in an outbreak-origin region of Romania.Journal of veterinary science · 2025Article
- ANASFV: a workflow for African swine fever virus whole-genome analysis.Microbial genomics · 2025Article
- Complete Genome Analysis of African Swine Fever Virus Isolated from Wild Boar, India, 2021.Emerging infectious diseases · 2025Article
- Article
- Phylogenomic analysis of African swine fever virus from the Philippines.Archives of virology · 2025Article
- Article
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19 authors at 9 institutions in 8 countries.
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No grant is acknowledged in the PubMed record.
Abstract
Introduction: African swine fever (ASF) is a contagious viral disease of pigs and wild boar that poses a major threat to the global swine industry. The genotype II African swine fever virus (ASFV) entered the European Union (EU) in 2014 and since then fourteen countries have been affected, Italy and North Macedonia being the last in 2022. While whole genome sequencing remains the gold standard for the identification of new genetic markers, sequencing of multiple loci with significant variations could be used as a rapid and cost-effective alternative to track outbreaks and study disease evolution in endemic areas. Materials and methods: To further our understanding of the epidemiology and spread of ASFV in Europe, 382 isolates collected during 2007 to 2022 were sequenced. The study was initially performed by sequencing the central variable region (CVR), the intergenic region (IGR) between the Results: The combination of the results obtained by sequencing these variable regions allowed to differentiate the European II-ASFV genotypes into 24 different groups. In addition, the SNP identified in the IGR Discussion: These findings describe a new multi-gene approach sequencing method that can be used in routine genotyping to determine the origin of new introductions in ASF-free areas and track infection dynamics in endemic areas.
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