Evidence map›Paper›PMID 36759711›Full record

ArticleNature immunology2023

The endogenous repertoire harbors self-reactive CD4

Victoria Lee, Donald M Rodriguez, Nicole K Ganci, Sharon Zeng, Junting Ai, Jaime L Chao, Matthew T Walker, Christine H Miller, David E J Klawon, Mary H Schoenbach and 5 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Breakdown and Repair of Peripheral Immune Tolerance in Type 1 Diabetes.Cold Spring Harbor perspectives in medicine · 2024
    Review
  8. Review
  9. T cell help shapes B cell tolerance.Science immunology · 2024
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Renegade T cell clones and autoimmune disease.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Victoria Lee *Interdisciplinary Scientist Training Program, University of Chicago, Chicago, IL, USA.
Donald M Rodriguez *Interdisciplinary Scientist Training Program, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-2534-1480
Nicole K GanciCommittee on Immunology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-8037-607X
Sharon ZengDepartment of Pathology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-7150-1345
Junting AiSection of Rheumatology, Department of Medicine and Gwen Knapp Center for Lupus and Immunology Research, University of Chicago, Chicago, IL, USA.
Jaime L ChaoCommittee on Immunology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-1872-734X
Matthew T WalkerCommittee on Immunology, University of Chicago, Chicago, IL, USA.
Christine H MillerInterdisciplinary Scientist Training Program, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-2176-9516
David E J KlawonCommittee on Immunology, University of Chicago, Chicago, IL, USA.
Mary H SchoenbachDepartment of Pathology, University of Chicago, Chicago, IL, USA.
Domenick E KennedySection of Rheumatology, Department of Medicine and Gwen Knapp Center for Lupus and Immunology Research, University of Chicago, Chicago, IL, USA.
Mark Maienschein-ClineResearch Informatics Core, Research Resources Center, University of Illinois at Chicago, Chicago, IL, USA.
Nicholas D SocciBioinformatics Core, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Marcus R ClarkSection of Rheumatology, Department of Medicine and Gwen Knapp Center for Lupus and Immunology Research, University of Chicago, Chicago, IL, USA.
Peter A SavageDepartment of Pathology, University of Chicago, Chicago, IL, USA. psavage@bsd.uchicago.edu.ORCID http://orcid.org/0000-0002-2506-7717
University of Chicago · USAbbVie (United States) · USMemorial Sloan Kettering Cancer Center · USUniversity of Illinois Chicago · USUniversity of Washington · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI CHIEN-MIN KAO · 1985 to 2026
$122.1M
Strengthening Stakeholder Engagement in Human Research Protections.UL1TR002003 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KARNIK, NIRANJAN SUBHASH, MERMELSTEIN, ROBIN J. · 2016 to 2024
$33.7M
MEDICAL SCIENTIST TRAININGT32GM007281 · NIGMS · UNIVERSITY OF CHICAGO · PI CLARK, MARCUS RAMSAY · 1985 to 2022
$32.1M
INTERDISCIPLINARY TRAINING PROGRAM IN IMMUNOLOGYT32AI007090 · NIAID · UNIVERSITY OF CHICAGO · PI Peter Aidan Savage · 1985 to 2026
$11.7M
Role of CXCR4 in immunoglobulin light chain recombinationR01AI150860 · NIAID · UNIVERSITY OF CHICAGO · PI CLARK, MARCUS RAMSAY, MANDAL, MALAY · 2021 to 2025
$2.9M
The epigenetic reader BRWD1 in peripheral adaptive immunityR01AI143778 · NIAID · UNIVERSITY OF CHICAGO · PI CLARK, MARCUS RAMSAY · 2019 to 2023
$2.4M
Specificity of regulatory T cell suppression during infectionU01AI154560 · NIAID · UNIVERSITY OF CHICAGO · PI SAVAGE, PETER AIDAN · 2021 to 2025
$2.0M
Function of Aire-dependent regulatory T cells in immune toleranceR01AI110507 · NIAID · UNIVERSITY OF CHICAGO · PI SAVAGE, PETER AIDAN · 2015 to 2019
$1.7M
Development and specificity of endogeneous tumor-infiltrating regulatory T cellsR01CA160371 · NCI · UNIVERSITY OF CHICAGO · PI SAVAGE, PETER AIDAN · 2011 to 2015
$1.6M
Defining tolerance mechanisms regulating self-specific T cellsF30CA217109 · NCI · UNIVERSITY OF CHICAGO · PI LEE, VICTORIA · 2017 to 2021
$250k
Specificity and function of memory-phenotype CD8+ T cells in the tumor environmentF30CA236061 · NCI · UNIVERSITY OF CHICAGO · PI MILLER, CHRISTINE · 2019 to 2022
$203k
NCATS NIH HHS UL1 TR002003NCI NIH HHS F30 CA217109NCI NIH HHS F30 CA236061NCI NIH HHS F30 CA247264NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA014599NCI NIH HHS R01 CA160371NIAID NIH HHS R01 AI110507NIAID NIH HHS R01 AI143778NIAID NIH HHS R01 AI150860NIAID NIH HHS T32 AI007090NIAID NIH HHS U01 AI154560NIGMS NIH HHS T32 GM007281
6 · The paper itself

Abstract

The T cell repertoire of healthy mice and humans harbors self-reactive CD4

Indexed as

CD4-Positive T-LymphocytesT Follicular Helper CellsT-Lymphocytes, RegulatoryAnimalsAutoimmunityCell DifferentiationClone CellsHumansMicePhenotypeT-Lymphocytes, Helper-Inducer

Identifiers

PMID36759711
PMCPMC9992328
OpenAlexW4319826071

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.