Evidence map›Paper›PMID 36759523›Full record

ArticleNature communications2023

ZBTB12 is a molecular barrier to dedifferentiation in human pluripotent stem cells.

Dasol Han, Guojing Liu, Yujeong Oh, Seyoun Oh, Seungbok Yang, Lori Mandjikian, Neha Rani, Maria C Almeida, Kenneth S Kosik, Jiwon Jang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

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  15. TheFrontiers in immunology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 5 countries.

Dasol Han *Neuroscience Research Institute, Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA.ORCID 0000-0002-3181-7465
Guojing Liu *Neuroscience Research Institute, Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA.
Yujeong Oh *Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Korea.ORCID 0000-0001-6219-8989
Seyoun OhDepartment of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Korea.
Seungbok YangDepartment of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Korea.
Lori MandjikianNeuroscience Research Institute, Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA.
Neha RaniNeuroscience Research Institute, Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA.
Maria C AlmeidaNeuroscience Research Institute, Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA.ORCID 0000-0002-2012-3169
Kenneth S KosikNeuroscience Research Institute, Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, CA, USA. kenneth.kosik@lifesci.ucsb.edu.ORCID 0000-0003-3224-5179
Jiwon JangDepartment of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Korea. jiwonjang@postech.ac.kr.ORCID 0000-0002-5884-5685
University of California, Santa Barbara · USPohang University of Science and Technology · KR

Funding

Project 3: Autophagy dysfunction and neuronal activity in FTDU54NS100717 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI GAN, LI · 2016 to 2020
$10.8M
NINDS NIH HHS U54 NS100717
6 · The paper itself

Abstract

Development is generally viewed as one-way traffic of cell state transition from primitive to developmentally advanced states. However, molecular mechanisms that ensure the unidirectional transition of cell fates remain largely unknown. Through exact transcription start site mapping, we report an evolutionarily conserved BTB domain-containing zinc finger protein, ZBTB12, as a molecular barrier for dedifferentiation of human pluripotent stem cells (hPSCs). Single-cell RNA sequencing reveals that ZBTB12 is essential for three germ layer differentiation by blocking hPSC dedifferentiation. Mechanistically, ZBTB12 fine-tunes the expression of human endogenous retrovirus H (HERVH), a primate-specific retrotransposon, and targets specific transcripts that utilize HERVH as a regulatory element. In particular, the downregulation of HERVH-overlapping long non-coding RNAs (lncRNAs) by ZBTB12 is necessary for a successful exit from a pluripotent state and lineage derivation. Overall, we identify ZBTB12 as a molecular barrier that safeguards the unidirectional transition of metastable stem cell fates toward developmentally advanced states.

Indexed as

Pluripotent Stem CellsRNA, Long NoncodingAnimalsCell DifferentiationDNA-Binding ProteinsGerm LayersHumansPrimatesTranscription FactorsDNA-Binding ProteinsRNA, Long NoncodingTranscription FactorsZBTB12 protein, human

Identifiers

PMID36759523
PMCPMC9911396
OpenAlexW4319821910

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.