Evidence map›Paper›PMID 36758522›Full record

ArticleCell host & microbe2023

Deficient butyrate-producing capacity in the gut microbiome is associated with bacterial network disturbances and fatigue symptoms in ME/CFS.

Cheng Guo, Xiaoyu Che, Thomas Briese, Amit Ranjan, Orchid Allicock, Rachel A Yates, Aaron Cheng, Dana March, Mady Hornig, Anthony L Komaroff and 8 more

Registry-linked trialOpen access · hybridAbstract readComment
In one paragraph

Article in Cell host & microbe, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05874089 (The Role of VSL#3® in the Treatment of Fatigue and Other Symptoms in Long Covid-19 Syndrome), which is not on this map. Cited by 111 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed, 4 pooled it
34.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05874089 naunknown statusnot on this map

The Role of VSL#3® in the Treatment of Fatigue and Other Symptoms in Long Covid-19 Syndrome: a Randomized, Double-blind, Placebo-controlled Study (DELong#3)

TypeinterventionalSponsorFondazione IRCCS Ca' Granda, Ospedale Maggiore PoliclinicoRan2022 to 2023Enrolled96ConditionsLong COVIDArmsVSL#3®, Placebo
3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 4 syntheses or guidelines pooled it, 150 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Recent research in myalgic encephalomyelitis/chronic fatigue syndrome: an evidence map.Health technology assessment (Winchester, England) · 2025
    Pooled it
  4. Pooled it
  5. Trial
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Cheng GuoCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Xiaoyu CheCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA; Department of Biostatistics, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Thomas BrieseCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA; Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Amit RanjanCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Orchid AllicockCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Rachel A YatesCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Aaron ChengCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Dana MarchDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Mady HornigDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Anthony L KomaroffDivision of General Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Susan LevineLevine Clinic, New York, NY 10021, USA.
Lucinda BatemanBateman Horne Center, Salt Lake City, UT 84102, USA.
Suzanne D VernonBateman Horne Center, Salt Lake City, UT 84102, USA.
Nancy G KlimasInstitute for Neuro-Immune Medicine, College of Osteopathic Medicine, Nova Southeastern University, Fort Lauderdale, FL 33314, USA; Miami VA Medical Center, Miami, FL 33125, USA.
Jose G MontoyaPalo Alto Medical Foundation, Jack S. Remington Laboratory for Specialty Diagnostics of Toxoplasmosis, Palo Alto, CA 94301, USA.
Daniel L PetersonSierra Internal Medicine at Incline Village, Incline Village, NV 89451, USA.
W Ian LipkinCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA; Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY 10032, USA; Department of Pathology and Cell Biology, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Brent L WilliamsCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA; Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY 10032, USA; Department of Pathology and Cell Biology, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA. Electronic address: bw2101@cumc.columbia.edu.
Columbia University · USBateman Horne Center · USBrigham and Women's Hospital · USNova Southeastern University · USSierra Nevada College · US

Funding

Project 3 : Clinical correlates and diagnostics in ME/CFSU54AI138370 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIPKIN, W. IAN · 2017 to 2022
$10.7M
Microbial Discovery and Immunity in ME/CFSR56AI120724 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HORNIG, MADY HORNIG, LIPKIN, W. IAN · 2015 to 2015
$766k
NIAID NIH HHS R56 AI120724NIAID NIH HHS U54 AI138370
6 · The paper itself

Abstract

Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is characterized by unexplained debilitating fatigue, cognitive dysfunction, gastrointestinal disturbances, and orthostatic intolerance. Here, we report a multi-omic analysis of a geographically diverse cohort of 106 cases and 91 healthy controls that revealed differences in gut microbiome diversity, abundances, functional pathways, and interactions. Faecalibacterium prausnitzii and Eubacterium rectale, which are both recognized as abundant, health-promoting butyrate producers in the human gut, were reduced in ME/CFS. Functional metagenomics, qPCR, and metabolomics of fecal short-chain fatty acids confirmed a deficient microbial capacity for butyrate synthesis. Microbiome-based machine learning classifier models were robust to geographic variation and generalizable in a validation cohort. The abundance of Faecalibacterium prausnitzii was inversely associated with fatigue severity. These findings demonstrate the functional nature of gut dysbiosis and the underlying microbial network disturbance in ME/CFS, providing possible targets for disease classification and therapeutic trials.

Indexed as

Fatigue Syndrome, ChronicGastrointestinal MicrobiomeBacteriaButyratesHumansMetabolomicsButyratesbiomarkersbutyrateco-abundance networkFaecalibacteriumirritable bowel syndromemetabolomicsmicrobiomemyalgic encephalomyelitis/chronic fatigue syndromeshort-chain fatty acidsshotgun metagenomics

Identifiers

PMID36758522
PMCPMC10183837
OpenAlexW4319593363

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.