Evidence map›Paper›PMID 36756004›Full record

ArticleNeurophotonics2023

Controlling the familywise error rate in widefield optical neuroimaging of functional connectivity in mice.

Brian R White, Claudia Chan, Temilola Adepoju, Russell T Shinohara, Simon Vandekar

Abstract read
In one paragraph

Article in Neurophotonics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Psychedelic 5-HTNature neuroscience · 2025
    Article
  2. Article
  3. Intact-skull cranial windows for widefield optical imaging in juvenile mice: complications and consequences.Journal of the Optical Society of America. A, Optics, image science, and vision · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Brian R WhiteUniversity of Pennsylvania, Children's Hospital of Philadelphia, Perelman School of Medicine, Division of Cardiology, Department of Pediatrics, Philadelphia, Pennsylvania, United States.ORCID https://orcid.org/0000-0001-5196-2339
Claudia ChanUniversity of Pennsylvania, Children's Hospital of Philadelphia, Perelman School of Medicine, Division of Cardiology, Department of Pediatrics, Philadelphia, Pennsylvania, United States.ORCID https://orcid.org/0000-0003-1125-7920
Temilola AdepojuUniversity of Pennsylvania, Children's Hospital of Philadelphia, Perelman School of Medicine, Division of Cardiology, Department of Pediatrics, Philadelphia, Pennsylvania, United States.ORCID https://orcid.org/0000-0002-8099-4230
Russell T ShinoharaUniversity of Pennsylvania, Perelman School of Medicine, Department of Biostatistics, Epidemiology, and Informatics, Philadelphia, Pennsylvania, United States.
Simon VandekarVanderbilt University, Department of Biostatistics, Nashville, Tennessee, United States.

Funding

Statistical Methods for Multilevel Multivariate Functional StudiesR01NS060910 · NINDS · JOHNS HOPKINS UNIVERSITY · PI Ciprian M Crainiceanu · 2009 to 2026
$8.3M
Inter-modal Coupling Image AnalyticsR01MH112847 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Theodore Satterthwaite, Russell Takeshi Shinohara · 2017 to 2026
$5.9M
Harmonization of Multi-Site Neuroimaging Data from Complex Study DesignsR01MH123550 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI SHINOHARA, RUSSELL TAKESHI · 2020 to 2025
$4.0M
Advanced Statistical Analytics of MRI in MSR01NS112274 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI SHINOHARA, RUSSELL TAKESHI · 2020 to 2024
$2.8M
Semiparametric Inference for Psychiatric NeuroimagingR01MH123563 · NIMH · VANDERBILT UNIVERSITY MEDICAL CENTER · PI VANDEKAR, SIMON NEIL · 2020 to 2024
$2.1M
Optical Functional Neuroimaging of Acute and Chronic HypoxiaK08NS117897 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI WHITE, BRIAN RICHARD · 2020 to 2024
$843k
NIMH NIH HHS R01 MH112847NIMH NIH HHS R01 MH123550NIMH NIH HHS R01 MH123563NINDS NIH HHS K08 NS117897NINDS NIH HHS R01 NS060910NINDS NIH HHS R01 NS112274
6 · The paper itself

Abstract

Significance: Statistical inference in functional neuroimaging is complicated by the multiple testing problem and spatial autocorrelation. Common methods in functional magnetic resonance imaging to control the familywise error rate (FWER) include random field theory (RFT) and permutation testing. The ability of these methods to control the FWER in optical neuroimaging has not been evaluated. Aim: We attempt to control the FWER in optical intrinsic signal imaging resting-state functional connectivity using both RFT and permutation inference at a nominal value of 0.05. The FWER was derived using a mass empirical analysis of real data in which the null is known to be true. Approach: Data from normal mice were repeatedly divided into two groups, and differences between functional connectivity maps were calculated with pixel-wise Results: Gaussian RFT resulted in a higher than expected FWER with either cluster-based (0.15) or pixel-based (0.62) methods. Conclusions: RFT can lead to highly inflated FWERs. Although

Indexed as

functional connectivityfunctional neuroimagingmultiple testing problemoptical intrinsic signalrandom field theorystatistics

Identifiers

PMID36756004
PMCPMC9896098

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.