Evidence map›Paper›PMID 36751037›Full record

ArticleAmerican journal of medical genetics. Part A2023

A mutational hotspot in AMOTL1 defines a new syndrome of orofacial clefting, cardiac anomalies, and tall stature.

Alanna Strong, Soumya Rao, Sandra von Hardenberg, Dong Li, Liza L Cox, Paul C Lee, Li Q Zhang, Waheed Awotoye, Tamir Diamond, Jessica Gold and 28 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

38 authors at 19 institutions in 9 countries.

Alanna StrongThe Division of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.ORCID 0000-0001-9261-244X
Soumya RaoDepartment of Oral & Craniofacial Sciences, School of Dentistry, University of Missouri-Kansas City Kansas City, Missouri, USA.
Sandra von HardenbergDepartment of Human Genetics, Hannover Medical School, Hannover, Germany.
Dong LiThe Division of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Liza L CoxDepartment of Oral & Craniofacial Sciences, School of Dentistry, University of Missouri-Kansas City Kansas City, Missouri, USA.
Paul C LeeDivision of Genetics and Genomic Medicine, Department of Pediatrics, Washington University School of Medicine, St Louis, Missouri, USA.
Li Q ZhangDepartment of Oral & Craniofacial Sciences, School of Dentistry, University of Missouri-Kansas City Kansas City, Missouri, USA.
Waheed AwotoyeDepartment of Orthodontics, College of Dentistry, University of Iowa, Iowa, USA.
Tamir DiamondDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Jessica GoldThe Division of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Catherine GoochDivision of Genetics and Genomic Medicine, Department of Pediatrics, Washington University School of Medicine, St Louis, Missouri, USA.ORCID 0000-0002-0919-7933
Lord Jephthah Joojo GowansDepartment of Biochemistry and Biotechnology, Kwame Nkurumah University of Science and Technology, Kumasi, Ghana.ORCID 0000-0003-0080-9101
Hakon HakonarsonThe Division of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Anne HingDivision of Craniofacial Medicine, Department of Pediatrics, University of Washington, Seattle, Washington, USA.
Kathleen LoomesDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Nicole MartinDivision of Clinical & Metabolic Genetics and Department of Genetic Counselling, The Hospital for Sick Children, Toronto, Ontario, Canada.
Mary L MarazitaDepartment of Oral and Craniofacial Sciences, Center for Craniofacial and Dental Genetics School of Dental Medicine, Pittsburgh, Pennsylvania, USA.
Tarja MononenDepartment of Clinical Genetics, Kuopio University Hospital, Kuopio, Finland.
David PiccoliDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Rolph PfundtDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.
Salmo RaskinAssistance Center for Cleft Lip and Palate (CAIF), Curitiba, Parana, Brazil.
Stephen W SchererThe Centre for Applied Genomics and Department of Genetics & Genome Biology, The Hospital for Sick Children, Toronto, Ontario, Canada.ORCID 0000-0002-8326-1999
Nara SobrieraMcKusick-Nathans Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0002-5228-5613
Courtney VaccaroThe Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Xiang WangThe Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Deborah WatsonThe Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Rosanna WeksbergInstitute of Medical Sciences and Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-6501-4150
Elizabeth BhojThe Division of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Jeffrey C MurrayDepartment of Pediatrics, University of Iowa, Iowa City, Iowa, USA.
Andrew C LidralLidral Orthodontics, Rockford, Michigan, USA.
Azeez ButaliDepartments of Oral Pathology, Radiology and Medicine, College of Dentistry & Pediatrics, Carver College of Medicine, University of Iowa, Iowa City, Iowa, USA.ORCID 0000-0002-1229-5964
Michael F BuckleyNSW Health Pathology Genomics Laboratory, Prince of Wales Hospital, Randwick, New South Wales, Australia.
Tony RoscioliNSW Health Pathology Genomics Laboratory, Prince of Wales Hospital, Randwick, New South Wales, Australia.
David A KoolenDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.
Laurie H SeaverSpectrum Health Helen DeVos Children's Hospital, Grand Rapids, Michigan, USA.ORCID 0000-0001-9136-101X
Cynthia A ProwsDivisions of Human Genetics and Patient Services, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
Rolf W StottmannDivisions of Human Genetics and Patient Services, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
Timothy C CoxDepartment of Oral & Craniofacial Sciences, School of Dentistry, University of Missouri-Kansas City Kansas City, Missouri, USA.ORCID 0000-0001-8015-5528
Children's Hospital of Philadelphia · USUniversity of Missouri–Kansas City · USUniversity of Iowa · USUniversity of Toronto · CACincinnati Children's Hospital Medical Center · USRadboud University Nijmegen · NLWashington University in St. Louis · USAmerican Association of Orthodontists · USGrand Rapids Community College · USHospital for Sick Children · CAJohns Hopkins University · USKuopio University Hospital · FIKwame Nkrumah University of Science and Technology · GHMedizinische Hochschule Hannover · DEPrince of Wales Hospital · AUUniversidade Federal do Paraná · BRUniversity of Pittsburgh · USUniversity of Washington · USUNSW Sydney · AU

Funding

Polygenic Risk Scores for Healthier African American FamiliesU01HG011172 · NHGRI · CINCINNATI CHILDRENS HOSP MED CTR · PI Leah Claire Kottyan, LISA J MARTIN · 2020 to 2026
$7.2M
Molecular Genetic Epidemiology of Cleft Lip and PalateR37DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2004 to 2013
$6.8M
Cleft Lip Genetics: A Multi Center International ConsortiumR01DE014667 · NIDCR · UNIVERSITY OF IOWA · PI LIDRAL, ANDREW C · 2001 to 2009
$4.2M
Engaging adolescents in decisions about return of genomic research resultsR01HG010166 · NHGRI · CINCINNATI CHILDRENS HOSP MED CTR · PI MCGOWAN, MICHELLE L, MYERS, MELANIE F · 2019 to 2023
$3.6M
Forward genetic analysis of congenital craniofacial malformationsR01DE027091 · NIDCR · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI STOTTMANN, ROLF W · 2019 to 2023
$2.9M
Molecular and cellular mechanisms causing cleft lip/palateR01DE027879 · NIDCR · UNIVERSITY OF MISSOURI KANSAS CITY · PI COX, TIMOTHY CHILTON · 2019 to 2023
$2.8M
Novel gene discovery in disorders of the liver and biliary treeK08DK128606 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI Alanna Strong · 2022 to 2026
$821k
Elucidating Cleft Etiology Employing Multiplex and Twin Families (ElCEEMuTF)K43DE029427 · NIDCR · KWAME NKRUMAH UNIVERSITY/SCIENCE/TECH · PI GOWANS, LORD JEPHTHAH JOOJO · 2019 to 2023
$529k
NHGRI NIH HHS R01 HG010166NHGRI NIH HHS U01 HG011172NIDCR NIH HHS K43 DE029427NIDCR NIH HHS R01 DE014667NIDCR NIH HHS R01 DE027091NIDCR NIH HHS R01 DE027879NIDCR NIH HHS R37 DE008559NIDDK NIH HHS K08 DK128606NIH HHS K08DK128606NIH HHS R01-016148NIH HHS R01-DE014667NIH HHS R01 DE027091NIH HHS R01 DE027879NIH HHS R37-DE008559NIH HHS X01-HL132363NIH HHS X01-HL136465
6 · The paper itself

Abstract

AMOTL1 encodes angiomotin-like protein 1, an actin-binding protein that regulates cell polarity, adhesion, and migration. The role of AMOTL1 in human disease is equivocal. We report a large cohort of individuals harboring heterozygous AMOTL1 variants and define a core phenotype of orofacial clefting, congenital heart disease, tall stature, auricular anomalies, and gastrointestinal manifestations in individuals with variants in AMOTL1 affecting amino acids 157-161, a functionally undefined but highly conserved region. Three individuals with AMOTL1 variants outside this region are also described who had variable presentations with orofacial clefting and multi-organ disease. Our case cohort suggests that heterozygous missense variants in AMOTL1, most commonly affecting amino acid residues 157-161, define a new orofacial clefting syndrome, and indicates an important functional role for this undefined region.

Indexed as

Cleft LipCleft PalateHeart Defects, CongenitalAngiomotinsHumansMutationMutation, MissenseAMOTL1 protein, humanAngiomotinscleft lipcleft palatecongenital heart diseaseexome sequencinggenome sequencingYAP

Identifiers

PMID36751037
PMCPMC10081944
OpenAlexW4319461405

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.