Evidence map›Paper›PMID 36750796›Full record

ArticleBMC psychiatry2023

Nexus between genome-wide copy number variations and autism spectrum disorder in Northeast Han Chinese population.

Shuang Qiu, Yingjia Qiu, Yong Li, Xiaojuan Zhu, Yunkai Liu, Yichun Qiao, Yi Cheng, Yawen Liu

Open access · goldAbstract read
In one paragraph

Article in BMC psychiatry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Shuang QiuDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University, Changchun, 130021, Jilin, China.
Yingjia QiuChina-Japan Union Hospital, Jilin University, Changchun, 130033, Jilin, China.
Yong LiDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University, Changchun, 130021, Jilin, China.
Xiaojuan ZhuThe Key Laboratory of Molecular Epigenetics of Ministry of Education, Institute of Cytology and Genetics, Northeast Normal University, Changchun, 130021, Jilin, China.
Yunkai LiuDepartment of Cardiovascular Diseases, the First Hospital of Jilin University, Changchun, 130021, Jilin, China.
Yichun QiaoDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University, Changchun, 130021, Jilin, China.
Yi ChengDepartment of Cardiovascular Diseases, the First Hospital of Jilin University, Changchun, 130021, Jilin, China. chengyi@jlu.edu.cn.
Yawen LiuDepartment of Epidemiology and Biostatistics, School of Public Health, Jilin University, Changchun, 130021, Jilin, China. ywliu@jlu.edu.cn.
Jilin University · CNFirst Hospital of Jilin University · CNNortheast Normal University · CNUnion Hospital · CN

Funding

Graduate Innovation Fund of Jilin University 101832018C064National Natural Science Foundation of China 81973120National Natural Science Foundation of China 82204130the Ministry of Science and Technology of the People´s Republic of China 2015DFA31580the Ministry of Science and Technology of the People´s Republic of China 2018YFC1311600
6 · The paper itself

Abstract

backgroundAutism spectrum disorder (ASD) is a common neurodevelopmental disorder, with an increasing prevalence worldwide. Copy number variation (CNV), as one of genetic factors, is involved in ASD etiology. However, there exist substantial differences in terms of location and frequency of some CNVs in the general Asian population. Whole-genome studies of CNVs in Northeast Han Chinese samples are still lacking, necessitating our ongoing work to investigate the characteristics of CNVs in a Northeast Han Chinese population with clinically diagnosed ASD.

methodsWe performed a genome-wide CNVs screening in Northeast Han Chinese individuals with ASD using array-based comparative genomic hybridization.

resultsWe found that 22 kinds of CNVs (6 deletions and 16 duplications) were potentially pathogenic. These CNVs were distributed in chromosome 1p36.33, 1p36.31, 1q42.13, 2p23.1-p22.3, 5p15.33, 5p15.33-p15.2, 7p22.3, 7p22.3-p22.2, 7q22.1-q22.2, 10q23.2-q23.31, 10q26.2-q26.3, 11p15.5, 11q25, 12p12.1-p11.23, 14q11.2, 15q13.3, 16p13.3, 16q21, 22q13.31-q13.33, and Xq12-q13.1. Additionally, we found 20 potential pathogenic genes of ASD in our population, including eight protein coding genes (six duplications [DRD4, HRAS, OPHN1, SHANK3, SLC6A3, and TSC2] and two deletions [CHRNA7 and PTEN]) and 12 microRNAs-coding genes (ten duplications [MIR202, MIR210, MIR3178, MIR339, MIR4516, MIR4717, MIR483, MIR675, MIR6821, and MIR940] and two deletions [MIR107 and MIR558]).

conclusionWe identified CNVs and genes implicated in ASD risks, conferring perception to further reveal ASD etiology.

Indexed as

Autism Spectrum DisorderDNA Copy Number VariationsComparative Genomic HybridizationEast Asian PeopleHumansMicroRNAsMicroRNAsArray-based comparative genomic hybridizationAutism spectrum disorderCopy number variationsMicroRNAs

Identifiers

PMID36750796
PMCPMC9906952
OpenAlexW4319349374

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.