Evidence map›Paper›PMID 36749641›Full record

ArticleJCI insight2023

A specific molecular signature in SARS-CoV-2-infected kidney biopsies.

Pierre Isnard, Paul Vergnaud, Serge Garbay, Matthieu Jamme, Maeva Eloudzeri, Alexandre Karras, Dany Anglicheau, Valérie Galantine, Arwa Jalal Eddine, Clément Gosset and 13 more

Abstract read
In one paragraph

Article in JCI insight, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. CROI 2025: Acute and Postacute COVID-19.Topics in antiviral medicine · 2025
    Article
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Pierre IsnardUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Paul VergnaudUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Serge GarbayUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Matthieu JammeDepartment of Intensive Care Medicine, Centre Hospitalier Intercommunal de Poissy, Poissy, France.
Maeva EloudzeriUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Alexandre KarrasDepartment of Nephrology, Centre Hospitalier Universitaire Européen Georges Pompidou, Paris, France.
Dany AnglicheauUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Valérie GalantineDepartment of Nephrology, Centre Hospitalier Universitaire de la Guadeloupe, Pointe-à-Pitre, France.
Arwa Jalal EddineDepartment of Nephrology, Hôpital Foch, Paris, France.
Clément GossetDepartment of Nephrology, Centre Hospitalier Universitaire de La Réunion, Saint Denis de La Réunion, France.
Franck PourcineDepartment of Nephrology, Centre Hospitalier de Melun, Melun, France.
Mohammed ZarhrateGenomics Core Facility, Structure Fédérative de Recherche Necker, University of Paris, Paris, France.
Jean-Baptiste GibierDepartment of Pathology, Centre Hospitalier Universitaire (CHU) Lille, Lille, France.
Elena RensenImaging and Modeling Unit and.
Stefano PietropaoliStructural Virology Unit, Institut Pasteur, Paris, France.
Giovanna Barba-SpaethStructural Virology Unit, Institut Pasteur, Paris, France.
Jean-Paul Duong-Van-HuyenDepartment of Pathology, Centre Hospitalier Universitaire Necker-Enfants Malades, Assistance Publique - Hopitaux de Paris (AP-HP), Paris, France.
Thierry J MolinaDepartment of Pathology, Centre Hospitalier Universitaire Necker-Enfants Malades, Assistance Publique - Hopitaux de Paris (AP-HP), Paris, France.
Florian MuellerImaging and Modeling Unit and.
Christophe ZimmerImaging and Modeling Unit and.
Marco PontoglioUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Fabiola TerziUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.
Marion RabantUniversity of Paris Cité, INSERM U1151, CNRS UMR 8253, Institut Necker-Enfants Malades, Département Croissance et Signalisation, Paris, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute kidney injury is one of the most important complications in patients with COVID-19 and is considered a negative prognostic factor with respect to patient survival. The occurrence of direct infection of the kidney by SARS-CoV-2, and its contribution to the renal deterioration process, remain controversial issues. By studying 32 renal biopsies from patients with COVID-19, we verified that the major pathological feature of COVID-19 is acute tubular injury (ATI). Using single-molecule fluorescence in situ hybridization, we showed that SARS-CoV-2 infected living renal cells and that infection, which paralleled renal angiotensin-converting enzyme 2 expression levels, was associated with increased death. Mechanistically, a transcriptomic analysis uncovered specific molecular signatures in SARS-CoV-2-infected kidneys as compared with healthy kidneys and non-COVID-19 ATI kidneys. On the other hand, we demonstrated that SARS-CoV-2 and hantavirus, 2 RNA viruses, activated different genetic networks despite triggering the same pathological lesions. Finally, we identified X-linked inhibitor of apoptosis-associated factor 1 as a critical target of SARS-CoV-2 infection. In conclusion, this study demonstrated that SARS-CoV-2 can directly infect living renal cells and identified specific druggable molecular targets that can potentially aid in the design of novel therapeutic strategies to preserve renal function in patients with COVID-19.

Indexed as

COVID-19SARS-CoV-2BiopsyHumansIn Situ Hybridization, FluorescenceKidneyApoptosisCOVID-19Molecular pathologyNephrology

Identifiers

PMID36749641
PMCPMC10077488

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.