Evidence map›Paper›PMID 36748556›Full record

ArticleMicrobial genomics2022

An ST131 clade and a phylogroup A clade bearing an O101-like O-antigen cluster predominate among bloodstream

Ayorinde O Afolayan, A Oladipo Aboderin, Anderson O Oaikhena, Erkison Ewomazino Odih, Veronica O Ogunleye, Adeyemi T Adeyemo, Abolaji T Adeyemo, Oyeniyi S Bejide, Anthony Underwood, Silvia Argimón and 5 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. High clonal diversity, resistome, and virulome ofFrontiers in microbiology · 2026
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Microbial genomics · 2025
    Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Ayorinde O AfolayanGlobal Health Research Unit for the Genomic Surveillance of Antimicrobial Resistance, Department of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Ibadan, Oyo State, Nigeria.
A Oladipo AboderinDepartment of Medical Microbiology and Parasitology, Obafemi Awolowo University Teaching Hospitals Complex, Ile-Ife, Osun State, Nigeria.
Anderson O OaikhenaGlobal Health Research Unit for the Genomic Surveillance of Antimicrobial Resistance, Department of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Ibadan, Oyo State, Nigeria.
Erkison Ewomazino OdihGlobal Health Research Unit for the Genomic Surveillance of Antimicrobial Resistance, Department of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Ibadan, Oyo State, Nigeria.
Veronica O OgunleyeDepartment of Medical Microbiology and Parasitology, University College Hospital, Ibadan, Oyo State, Nigeria.
Adeyemi T AdeyemoDepartment of Medical Microbiology and Parasitology, Obafemi Awolowo University Teaching Hospitals Complex, Ile-Ife, Osun State, Nigeria.
Abolaji T AdeyemoDepartment of Medical Microbiology and Parasitology, University of Osun Teaching Hospital, Osogbo, Osun State, Nigeria.
Oyeniyi S BejideGlobal Health Research Unit for the Genomic Surveillance of Antimicrobial Resistance, Department of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Ibadan, Oyo State, Nigeria.
Anthony UnderwoodCentre for Genomic Pathogen Surveillance, Big Data Institute, University of Oxford, Old Road Campus, Oxford, UK.
Silvia ArgimónCentre for Genomic Pathogen Surveillance, Big Data Institute, University of Oxford, Old Road Campus, Oxford, UK.
Monica AbrudanCentre for Genomic Pathogen Surveillance, Big Data Institute, University of Oxford, Old Road Campus, Oxford, UK.
Abiodun EgwuenuNigeria Centre for Disease Control, Jabi, Abuja, Nigeria.
Chikwe IhekweazuNigeria Centre for Disease Control, Jabi, Abuja, Nigeria.
David M AanensenCentre for Genomic Pathogen Surveillance, Big Data Institute, University of Oxford, Old Road Campus, Oxford, UK.
Iruka N OkekeGlobal Health Research Unit for the Genomic Surveillance of Antimicrobial Resistance, Department of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Ibadan, Oyo State, Nigeria.
University of Ibadan · NGUniversity of Oxford · GBNigeria Centre for Disease Control · NGOsun State University · NGObafemi Awolowo University Teaching Hospitals Complex · NGUniversity College Hospital, Ibadan · NG

Funding

Department of Health 16_136_111Medical Research Council MR/L00464X/1Wellcome TrustWellcome Trust 206194
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Escherichia coli InfectionsSepsisEscherichia coliHospitalsHumansNigeriaO AntigensRetrospective StudiesO Antigensantimicrobial resistancecpsACPEscherichia coligenomic surveillanceNigeriaST131

Identifiers

PMID36748556
PMCPMC9837563
OpenAlexW4313318089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.