Evidence map›Paper›PMID 36747621›Full record

ArticlebioRxiv : the preprint server for biology2023

The Australasian dingo archetype:

J William O Ballard, Matt A Field, Richard J Edwards, Laura A B Wilson, Loukas G Koungoulos, Benjamin D Rosen, Barry Chernoff, Olga Dudchenko, Arina Omer, Jens Keilwagen and 6 more

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 12 institutions in 4 countries.

J William O BallardSchool of Biosciences, University of Melbourne, Royal Parade, Parkville, Victoria 3052, Australia.ORCID 0000-0002-2358-6003
Matt A FieldCentre for Tropical Bioinformatics and Molecular Biology, College of Public Health, Medical and Veterinary Science, James Cook University, Cairns, Queensland 4870, Australia.ORCID 0000-0003-0788-6513
Richard J EdwardsSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney NSW 2052, Australia.ORCID 0000-0002-3645-5539
Laura A B WilsonSchool of Archaeology and Anthropology, The Australian National University, Acton, ACT 2600, Australia.ORCID 0000-0002-3779-8277
Loukas G KoungoulosDepartment of Archaeology, School of Philosophical and Historical Inquiry, the University of Sydney, Sydney, Australia 2006.ORCID 0000-0002-5148-0142
Benjamin D RosenAnimal Genomics and Improvement Laboratory, Agricultural Research Service USDA, Beltsville, MD 20705.ORCID 0000-0001-9395-8346
Barry ChernoffCollege of the Environment, Departments of Biology, and Earth & Environmental Sciences, Wesleyan University, Middletown, CT 06459, USA.ORCID 0000-0001-8439-4542
Olga DudchenkoThe Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX, 77030 USA.ORCID 0000-0001-9163-9544
Arina OmerCenter for Theoretical and Biological Physics, Rice University, Houston, TX 77005, USA.ORCID 0000-0003-1336-2505
Jens KeilwagenJulius Kühn-Institut, Erwin-Baur-Str. 27 06484 Quedlinburg, Germany.ORCID 0000-0002-6792-7076
Ksenia SkvortsovaGarvan Institute of Medical Research, Darlinghurst, NSW, Australia.ORCID 0000-0003-1400-1998
Ozren BogdanovicGarvan Institute of Medical Research, Darlinghurst, NSW, Australia.ORCID 0000-0001-5680-0056
Eva ChanGarvan Institute of Medical Research, Darlinghurst, NSW, Australia.ORCID 0000-0002-6104-3763
Robert ZammitVineyard Veterinary Hospital, 703 Windsor Rd, Vineyard, NSW 2765, Australia.ORCID 0000-0002-7520-8338
Vanessa HayesGarvan Institute of Medical Research, Darlinghurst, NSW, Australia.ORCID 0000-0002-4524-7280
Erez Lieberman AidenThe Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX, 77030 USA.ORCID 0000-0003-0634-6486
Garvan Institute of Medical Research · AUThe University of Sydney · AUAgricultural Research Service · USAustralian National University · AUBaylor College of Medicine · USBroad Institute · USCenter for Theoretical Biological Physics · USJulius Kühn-Institut · DENew South Wales Department of Health · AUThe University of Melbourne · AUUNSW Sydney · AUWesleyan University · US

Funding

Center for Genome ImagingRM1HG011016 · NHGRI · HARVARD MEDICAL SCHOOL · PI WU, CHAO-TING · 2021 to 2025
$12.2M
GENOME WIDE MAPPING OF LOOPS USING IN SITU HI-CUM1HG009375 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI LIEBERMAN-AIDEN, EREZ · 2017 to 2021
$4.7M
NHGRI NIH HHS RM1 HG011016NHGRI NIH HHS UM1 HG009375
6 · The paper itself

Abstract

Background: One difficulty in testing the hypothesis that the Australasian dingo is a functional intermediate between wild wolves and domesticated breed dogs is that there is no reference specimen. Here we link a high-quality Findings: We generated a high-quality chromosome-level reference genome assembly (Canfam_ADS) using a combination of Pacific Bioscience, Oxford Nanopore, 10X Genomics, Bionano, and Hi-C technologies. Compared to the previously published Desert dingo assembly, there are large structural rearrangements on Chromosomes 11, 16, 25 and 26. Phylogenetic analyses of chromosomal data from Cooinda the Alpine dingo and nine previously published Conclusions: These combined data support the hypothesis that the dingo Cooinda fits the spectrum of genetic and morphological characteristics typical of the Alpine ecotype. We propose that she be considered the archetype specimen for future research investigating the evolutionary history, morphology, physiology, and ecology of dingoes. The female has been taxidermically prepared and is now at the Australian Museum, Sydney.

Identifiers

PMID36747621
PMCPMC9900879
OpenAlexW4318293999

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.