Evidence map›Paper›PMID 36747529›Full record

ArticleHeliyon2023

Comprehensive analysis of prognosis of patients with GBM based on 4 m6A-related lncRNAs and immune cell infiltration.

Qisheng Luo, Zhenxiu Yang, Renzhi Deng, Xianhui Pang, Xu Han, Xinfu Liu, Jiahai Du, Yingzhao Tian, Jingzhan Wu, Chunhai Tang

Abstract read
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Qisheng LuoDepartment of Neurosurgery, Affiliated Hospital of Youjiang Medical University for Nationalities, BaiSe,Guangxi province, 533000, China.
Zhenxiu YangDepartment of Oncology, The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Renzhi DengDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Xianhui PangDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Xu HanDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Xinfu LiuDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Jiahai DuDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Yingzhao TianDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Jingzhan WuDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.
Chunhai TangDepartment of Neurosurgery(Trauma Surgery), The Second Affiliated Hospital of Guangxi Medical University,NanNing, Guangxi province,530000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: To investigate the immune cell infiltration status in glioblastoma multiforme (GBM) and construct a novel prognostic risk model that can predict patients' prognosis. Methods: The Cancer Genome Atlas (TCGA) database was used to obtain RNA-sequence information and relevant clinical data. We performed Pearson correlation, univariate Cox regression to screen m6A-related prognostic lncRNA. GMB patients' samples were separated into different clusters through the ConsensusClusterPlus package. The risk score model was established through LASSO regression analysis. Besides, KEGG pathway enrichment analysis was implemented. CIBERSORT algorithm was used to analyze the difference of 22 types of immune cell infiltration in different cluster of GBM patient. Cox regression analyses were used to verify the independence of the model and correlation analysis was performed to demonstrate the link between our model and clinical characteristics of GBM patients. Experiments were used to validate the differential expression of the model lncRNA in patients with different prognosis. Results: 17 lncRNA related to prognosis were screened from 1021 m6A-related lncRNAs. Further, four m6A-related lncRNAs that were significantly correlated with GBM prognosis were selected to establish our prognostic risk model, which had excellent accuracy and can independently predict the prognosis of GBM patients. The infiltration fractions of T regulatory cells, T cells CD4 memory activated and neutrophils were positively associated with risk score, which suggested a significant relationship between the model and tumor immune microenvironment. Conclusion: The m6A-related RNA risk model offered potential for identifying biomarkers of therapy and predicting prognosis of GBM patients.

Indexed as

Glioblastoma multiformeImmune cell infiltrationlncRNAm6a methylation modificationPrognosis

Identifiers

PMID36747529
PMCPMC9898620

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.