Evidence map›Paper›PMID 36747050›Full record

ArticleNature plants2023

Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics.

Adam L Healey, Bryan Piatkowski, John T Lovell, Avinash Sreedasyam, Sarah B Carey, Sujan Mamidi, Shengqiang Shu, Chris Plott, Jerry Jenkins, Travis Lawrence and 19 more

Abstract read
In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
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  3. Review
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  6. Article
  7. The Importance of thePlants (Basel, Switzerland) · 2026
    Review
  8. Article
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  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The Extended Synaptotagmins ofPlants (Basel, Switzerland) · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors.

Adam L HealeyGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA. ahealey@hudsonalpha.org.ORCID http://orcid.org/0000-0002-3088-6856
Bryan PiatkowskiBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.ORCID http://orcid.org/0000-0002-1334-8431
John T LovellGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-8938-1166
Avinash SreedasyamGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0001-7336-7012
Sarah B CareyGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-6431-0660
Sujan MamidiGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-3837-6121
Shengqiang ShuDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-4336-8994
Chris PlottGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-0109-5174
Jerry JenkinsGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-7943-3997
Travis LawrenceBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Blanka AgueroDepartment of Biology, Duke University, Durham, NC, USA.
Alyssa A CarrellBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Marta Nieto-LugildeDepartment of Biology, Duke University, Durham, NC, USA.ORCID http://orcid.org/0000-0002-1593-3853
Jayson TalagArizona Genomics Institute, University of Arizona, Tucson, AZ, USA.
Aaron DuffyDepartment of Biology, Duke University, Durham, NC, USA.
Sara JawdyBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Kelsey R CarterBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Lori-Beth BostonGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Teresa JonesGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Juan Jaramillo-ChicoDepartment of Biology, Duke University, Durham, NC, USA.
Alex HarkessGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Kerrie BarryDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Keykhosrow KeymaneshDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Diane BauerDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Jane GrimwoodGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-8356-8325
Lee GunterBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Jeremy SchmutzGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0001-8062-9172
David J WestonBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA. westondj@ornl.gov.ORCID http://orcid.org/0000-0002-4794-9913
A Jonathan ShawDepartment of Biology, Duke University, Durham, NC, USA. shaw@duke.edu.

Funding

National Science Foundation (NSF) DEB-1737899National Science Foundation (NSF) DEB-1928514National Science Foundation (NSF) DEP-1928514U.S. Department of Energy (DOE) DE-AC02-05CH11231U.S. Department of Energy (DOE) DE-AC05-00OR22725
6 · The paper itself

Abstract

Peatlands are crucial sinks for atmospheric carbon but are critically threatened due to warming climates. Sphagnum (peat moss) species are keystone members of peatland communities where they actively engineer hyperacidic conditions, which improves their competitive advantage and accelerates ecosystem-level carbon sequestration. To dissect the molecular and physiological sources of this unique biology, we generated chromosome-scale genomes of two Sphagnum species: S. divinum and S. angustifolium. Sphagnum genomes show no gene colinearity with any other reference genome to date, demonstrating that Sphagnum represents an unsampled lineage of land plant evolution. The genomes also revealed an average recombination rate an order of magnitude higher than vascular land plants and short putative U/V sex chromosomes. These newly described sex chromosomes interact with autosomal loci that significantly impact growth across diverse pH conditions. This discovery demonstrates that the ability of Sphagnum to sequester carbon in acidic peat bogs is mediated by interactions between sex, autosomes and environment.

Indexed as

EcosystemSphagnopsidaCarbon SequestrationClimateSex Chromosomes

Identifiers

PMID36747050
PMCPMC9946827

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.