Evidence map›Paper›PMID 36747006›Full record

ArticleEuropean journal of human genetics : EJHG2023

The neurodevelopmental and facial phenotype in individuals with a TRIP12 variant.

Mio Aerden, Anne-Sophie Denommé-Pichon, Dominique Bonneau, Ange-Line Bruel, Julian Delanne, Bénédicte Gérard, Benoît Mazel, Christophe Philippe, Lucile Pinson, Clément Prouteau and 48 more

Open access · greenAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

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  14. A rare inherited homozygous missense variant inTranslational pediatrics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

58 authors at 20 institutions in 11 countries.

Mio AerdenCenter for Human Genetics, University Hospitals Leuven, KU Leuven, Leuven, Belgium. mio.aerden@uzleuven.be.ORCID 0000-0001-5044-2120
Anne-Sophie Denommé-PichonUnité Fonctionnelle Innovation en Diagnostic génomique des maladies rares, FHU-TRANSLAD, CHU Dijon Bourgogne, Dijon, France.ORCID 0000-0002-8986-8222
Dominique BonneauDepartment of Biochemistry and Genetics, Angers University Hospital and UMR CNRS 6015-INSERM 1083, Angers, France.
Ange-Line BruelUnité Fonctionnelle Innovation en Diagnostic génomique des maladies rares, FHU-TRANSLAD, CHU Dijon Bourgogne, Dijon, France.ORCID 0000-0002-0526-465X
Julian DelanneUMR1231 GAD, Inserm - Université Bourgogne-Franche Comté, Dijon, France.
Bénédicte GérardLaboratoire de Diagnostic Génétique, Hôpitaux Universitaires de Strasbourg, Strasbourg, France.
Benoît MazelUMR1231 GAD, Inserm - Université Bourgogne-Franche Comté, Dijon, France.ORCID 0000-0002-1788-1495
Christophe PhilippeUnité Fonctionnelle Innovation en Diagnostic génomique des maladies rares, FHU-TRANSLAD, CHU Dijon Bourgogne, Dijon, France.ORCID 0000-0001-7098-6520
Lucile PinsonService de génétique - Centre de Référence Anomalies du Développement CLAD Sud Est, Groupement Hospitalier Est, Hospices Civils de Lyon, Bron, France.
Clément ProuteauDepartment of Biochemistry and Genetics, Angers University Hospital and UMR CNRS 6015-INSERM 1083, Angers, France.
Audrey PutouxCentre de Référence Anomalies du Développement et Syndromes Malformatifs Centre Est, Hospices Civils de Lyon, Lyon, France.
Frédéric Tran Mau-ThemUnité Fonctionnelle Innovation en Diagnostic génomique des maladies rares, FHU-TRANSLAD, CHU Dijon Bourgogne, Dijon, France.ORCID 0000-0002-3795-9456
Éléonore Viora-DupontUMR1231 GAD, Inserm - Université Bourgogne-Franche Comté, Dijon, France.ORCID 0000-0003-0999-9204
Antonio VitobelloUnité Fonctionnelle Innovation en Diagnostic génomique des maladies rares, FHU-TRANSLAD, CHU Dijon Bourgogne, Dijon, France.ORCID 0000-0003-3717-8374
Alban ZieglerDepartment of Biochemistry and Genetics, Angers University Hospital and UMR CNRS 6015-INSERM 1083, Angers, France.
Amélie PitonHôpitaux Universitaires de Strasbourg, Laboratoire de Diagnostic Génétique, Strasbourg, France.ORCID 0000-0003-0408-7468
Bertrand IsidorService de Genetique Medicale, CHU de Nantes & Inserm, CNRS, Universite de Nantes, l'institut du thorax, Nantes, France.
Christine FrancannetService de Genetique Medicale, CHU de Clermont-Ferrand, Clermont-Ferrand, France.
Pierre-Yves MaillardService de Genetique Medicale, IGMA, Hopitaux Universitaires de Strasbourg, Strasbourg, France.ORCID 0000-0002-7766-1072
Sophie JuliaService de Génétique Clinique, CHU Toulouse, Toulouse, France.
Anais PhilippeService de Genetique Medicale, IGMA, Hopitaux Universitaires de Strasbourg, Strasbourg, France.
Elise SchaeferService de Genetique Medicale, IGMA, Hopitaux Universitaires de Strasbourg, Strasbourg, France.
Saskia KoeneDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Claudia RuivenkampDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Mariette HofferDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.ORCID 0000-0002-1812-7670
Eric LegiusCenter for Human Genetics, University Hospitals Leuven, KU Leuven, Leuven, Belgium.
Miel TheunisCenter for Human Genetics, University Hospitals Leuven, KU Leuven, Leuven, Belgium.
Boris KerenGenetic Department, Pitié-Salpêtrière Hospital, AP-HP.Sorbonne Université, Paris, France.
Julien BurattiGenetic Department, Pitié-Salpêtrière Hospital, AP-HP.Sorbonne Université, Paris, France.ORCID 0000-0002-0901-0905
Perrine CharlesGenetic Department, Pitié-Salpêtrière Hospital, AP-HP.Sorbonne Université, Paris, France.
Thomas CourtinGenetic Department, Pitié-Salpêtrière Hospital, AP-HP.Sorbonne Université, Paris, France.
Mala Misra-IsrieDepartment of Human Genetics, Amsterdam University Medical Centers, Location Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.
Mieke van HaelstDepartment of Human Genetics, Amsterdam University Medical Centers, Location Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.ORCID 0000-0002-7519-0246
Quinten WaisfiszDepartment of Human Genetics, Amsterdam University Medical Centers, Location Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.
Dagmar WieczorekHeinrich-Heine-Universität, Institut für Humangenetik, Düsseldorf, Germany.
Ariane SchmetzHeinrich-Heine-Universität, Institut für Humangenetik, Düsseldorf, Germany.
Theresia HergetInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Fanny KortümInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Jasmin LisfeldInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
François-Guillaume DebrayCentre Hospitalier Universitaire de Liège, Center of Human Genetics, Liège, Belgium.
Nuria C BramswigHeinrich-Heine-Universität, Institut für Humangenetik, Düsseldorf, Germany.
Isis AtallahLausanne University Hospital, Division of Genetic Medicine, Lausanne, Switzerland.ORCID 0000-0002-0618-1549
Heidi FodstadLausanne University Hospital, Division of Genetic Medicine, Lausanne, Switzerland.
Guillaume JouretNational Center of Genetics (NCG), Laboratoire national de santé (LNS), Dudelange, Luxembourg.
Berta AlmogueraFundación Jiménez Díaz Hospital, Department of Genetics and Genomics, Madrid, Spain.
Saoud Tahsin-SwafiriFundación Jiménez Díaz Hospital, Department of Genetics and Genomics, Madrid, Spain.ORCID 0000-0003-3684-9076
Fernando Santos-SimarroInstitute of Medical and Molecular Genetics (INGEMM), Hospital Universitario La Paz, IdiPAZ, CIBERER, ISCIII, Madrid, Spain.
Maria Palomares-BraloInstitute of Medical and Molecular Genetics (INGEMM), Hospital Universitario La Paz, IdiPAZ, CIBERER, ISCIII, Madrid, Spain.
Vanesa López-GonzálezHospital Clínico Universitario Virgen de la Arrixaca, IMIB-Arrixaca, Sección de Genética Médica, Servicio de Pediatría, Murcia, Spain.
Maria KibaekPediatric Department, Odense University Hospital, Odense, Denmark.
Pernille M TørringDepartment of Clinical Genetics, Odense University Hospital, Odense, Denmark.
Alessandra RenieriMedical Genetics, University of Siena, Siena, Italy.
Lucia Pia BrunoMedical Genetics, University of Siena, Siena, Italy.
Katrin ÕunapTartu University Hospital, Genetic and Personalized Medicine Clinic, Department of Clinical Genetics, Tartu, Estonia.ORCID 0000-0002-4594-6364
Monica WojcikDepartment of Pediatrics, Boston Children's Hospital, Divisions of Newborn Medicine and Genetics and Genomics, Boston, MA, USA.
Tzung-Chien HsiehInstitute for Genomic Statistics and Bioinformatics, University Hospital Bonn, Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.
Peter KrawitzInstitute for Genomic Statistics and Bioinformatics, University Hospital Bonn, Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.
Hilde Van EschCenter for Human Genetics, University Hospitals Leuven, KU Leuven, Leuven, Belgium. hilde.vanesch@uzleuven.be.ORCID 0000-0002-9604-5726
Inserm · FRHôpitaux Universitaires de Strasbourg · FRCentre National de la Recherche Scientifique · FRSorbonne Université · FRAmsterdam University Medical Centers · NLHeinrich Heine University Düsseldorf · DELeiden University Medical Center · NLUniversität Hamburg · DECenter for Human Genetics · USHospices Civils de Lyon · FRHospital Universitario Fundación Jiménez Díaz · ESHospital Universitario La Paz · ESKU Leuven · BEOdense University Hospital · DKUniversity of Bonn · DEUniversity of Lausanne · CHUniversity of Siena · ITBroad Institute · USCentre Hospitalier Universitaire de Clermont-Ferrand · FRCentre Hospitalier Universitaire de Liège · BE

Funding

Joint Center for Mendelian GenomicsUM1HG008900 · NHGRI · BROAD INSTITUTE, INC. · PI O'DONNELL-LURIA, ANNE, REHM, HEIDI L · 2016 to 2020
$16.5M
NHGRI NIH HHS UM1 HG008900
6 · The paper itself

Abstract

Haploinsufficiency of TRIP12 causes a neurodevelopmental disorder characterized by intellectual disability associated with epilepsy, autism spectrum disorder and dysmorphic features, also named Clark-Baraitser syndrome. Only a limited number of cases have been reported to date. We aimed to further delineate the TRIP12-associated phenotype and objectify characteristic facial traits through GestaltMatcher image analysis based on deep-learning algorithms in order to establish a TRIP12 gestalt. 38 individuals between 3 and 66 years (F = 20, M = 18) - 1 previously published and 37 novel individuals - were recruited through an ERN ITHACA call for collaboration. 35 TRIP12 variants were identified, including frameshift (n = 15) and nonsense (n = 6) variants, as well as missense (n = 5) and splice (n = 3) variants, intragenic deletions (n = 4) and two multigene deletions disrupting TRIP12. Though variable in severity, global developmental delay was noted in all individuals, with language deficit most pronounced. About half showed autistic features and susceptibility to obesity seemed inherent to this disorder. A more severe expression was noted in individuals with a missense variant. Facial analysis showed a clear gestalt including deep-set eyes with narrow palpebral fissures and fullness of the upper eyelids, downturned corners of the mouth and large, often low-set ears with prominent earlobes. We report the largest cohort to date of individuals with TRIP12 variants, further delineating the associated phenotype and introducing a facial gestalt. These findings will improve future counseling and patient guidance.

Indexed as

Autism Spectrum DisorderIntellectual DisabilityNeurodevelopmental DisordersCarrier ProteinsHumansMutation, MissensePhenotypeUbiquitin-Protein LigasesCarrier ProteinsTRIP12 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID36747006
PMCPMC10133310
OpenAlexW4319299677

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.