Evidence map›Paper›PMID 36744032›Full record

ArticleFrontiers in physiology2023

A training pipeline of an arrhythmia classifier for atrial fibrillation detection using Photoplethysmography signal.

Sota Kudo, Zheng Chen, Xue Zhou, Leighton T Izu, Ye Chen-Izu, Xin Zhu, Toshiyo Tamura, Shigehiko Kanaya, Ming Huang

Abstract read
In one paragraph

Article in Frontiers in physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sota KudoComputational Systems Biology Lab, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Japan.
Zheng ChenISIR, Osaka University, Osaka, Japan.
Xue ZhouComputational Systems Biology Lab, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Japan.
Leighton T IzuDepartment of Pharmacology, University of California, Davis, Davis, CA, United States.
Ye Chen-IzuDepartment of Biomedical Engineering, University of California, Davis, Davis, CA, United States.
Xin ZhuBiomedical Information Engineering Lab, The University of Aizu, Aizu-Wakamatsu, Japan.
Toshiyo TamuraFuture Robotics Organization, Waseda University, Tokyo, Japan.
Shigehiko KanayaComputational Systems Biology Lab, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Japan.
Ming HuangComputational Systems Biology Lab, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Japan.

Funding

Mechanical Load Effects on Cardiac Function and Heart DiseasesR35HL166575 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Ye Chen-Izu · 2023 to 2026
$4.4M
The Functional Connectome of the Mechanically Loaded CardiomyocyteR01HL149431 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN-IZU, YE, IZU, LEIGHTON T. · 2020 to 2023
$2.7M
MECHANICAL LOAD EFFECT ON CARDIAC EXCITATION-CONTRACTION COUPLINGR01HL141460 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN-IZU, YE · 2019 to 2022
$2.6M
Novel Cell-in-Gel System for Mechanotransduction Study at the Single Cell LevelR01HL123526 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN-IZU, YE · 2015 to 2018
$1.8M
Decipher Mechano-Chemo-Transduction Pathway and Function in CardiomyocytesR01HL159993 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN-IZU, YE · 2021 to 2022
$1.5M
NHLBI NIH HHS R01 HL123526NHLBI NIH HHS R01 HL141460NHLBI NIH HHS R01 HL149431NHLBI NIH HHS R01 HL159993NHLBI NIH HHS R35 HL166575
6 · The paper itself

Abstract

Photoplethysmography (PPG) signal is potentially suitable in atrial fibrillation (AF) detection for its convenience in use and similarity in physiological origin to electrocardiogram (ECG). There are a few preceding studies that have shown the possibility of using the peak-to-peak interval of the PPG signal (PPIp) in AF detection. However, as a generalized model, the accuracy of an AF detector should be pursued on the one hand; on the other hand, its generalizability should be paid attention to in view of the individual differences in PPG manifestation of even the same arrhythmia and the existence of sub-types. Moreover, a binary classifier for atrial fibrillation and normal sinus rhythm is not convincing enough for the similarity between AF and ectopic beats. In this study, we project the atrial fibrillation detection as a multiple-class classification and try to propose a training pipeline that is advantageous both to the accuracy and generalizability of the classifier by designing and determining the configurable options of the pipeline, in terms of input format, deep learning model (with hyperparameter optimization), and scheme of transfer learning. With a rigorous comparison of the possible combinations of the configurable components in the pipeline, we confirmed that first-order difference of heartbeat sequence as the input format, a 2-layer

Indexed as

artificial neural networkatrial fibrillationdeep learningectopic beatsmodel generalizabilitynormal sinus rhythm

Identifiers

PMID36744032
PMCPMC9892629

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.