Evidence map›Paper›PMID 36743870›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2023

Single patch super-resolution of histopathology whole slide images: a comparative study.

Mehdi Afshari, Saba Yasir, Gary L Keeney, Rafael E Jimenez, Joaquin J Garcia, Hamid R Tizhoosh

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mehdi AfshariUniversity of Waterloo, Kimia Lab, Waterloo, Ontario, Canada.
Saba YasirMayo Clinic, Anatomic Pathology, Rochester, Minnesota, United States.
Gary L KeeneyMayo Clinic, Anatomic Pathology, Rochester, Minnesota, United States.
Rafael E JimenezMayo Clinic, Anatomic Pathology, Rochester, Minnesota, United States.ORCID https://orcid.org/0000-0003-2348-0214
Joaquin J GarciaMayo Clinic, Anatomic Pathology, Rochester, Minnesota, United States.
Hamid R TizhooshUniversity of Waterloo, Kimia Lab, Waterloo, Ontario, Canada.ORCID https://orcid.org/0000-0001-5488-601X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: The latest generation of scanners can digitize histopathology glass slides for computerized image analysis. These images contain valuable information for diagnostic and prognostic purposes. Consequently, the availability of high digital magnifications like Approach: Over the past decade, the digital solution of enhancing images resolution has been addressed by the concept of super resolution (SR). In addition, deep learning has offered state-of-the-art results for increasing the image resolution after acquisition. In this study, multiple deep learning networks designed for image SR are trained and assessed for the histopathology domain. Results: We report quantitative and qualitative comparisons of the results using publicly available cancer images to shed light on the benefits and challenges of deep learning for extrapolating image resolution in histopathology. Three pathologists evaluated the results to assess the quality and diagnostic value of generated SR images. Conclusions: Pixel-level information, including structures and textures in histopathology images, are learnable by deep networks; hence improving the resolution quantity of scanned slides is possible by training appropriate networks. Different SR networks may perform best for various cancer sites and subtypes.

Indexed as

deep neural networksgenerative adversarial networkshistopathologysuper-resolution

Identifiers

PMID36743870
PMCPMC9888549

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.