Evidence map›Paper›PMID 36743534›Full record

ArticleFrontiers in plant science2022

RNA-Seq reveals the key pathways and genes involved in the light-regulated flavonoids biosynthesis in mango (

Minjie Qian, Hongxia Wu, Chengkun Yang, Wencan Zhu, Bin Shi, Bin Zheng, Songbiao Wang, Kaibing Zhou, Aiping Gao

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Minjie QianSanya Nanfan Research Institute of Hainan University, Sanya, China.
Hongxia WuMinistry of Agriculture Key Laboratory of Tropical Fruit Biology, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang, China.
Chengkun YangSanya Nanfan Research Institute of Hainan University, Sanya, China.
Wencan ZhuSanya Nanfan Research Institute of Hainan University, Sanya, China.
Bin ShiSanya Nanfan Research Institute of Hainan University, Sanya, China.
Bin ZhengMinistry of Agriculture Key Laboratory of Tropical Fruit Biology, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang, China.
Songbiao WangMinistry of Agriculture Key Laboratory of Tropical Fruit Biology, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang, China.
Kaibing ZhouSanya Nanfan Research Institute of Hainan University, Sanya, China.
Aiping GaoTropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences & Ministry of Agriculture Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Haikou, China.
Hainan University · CNChinese Academy of Tropical Agricultural Sciences · CNSanya University · CNSouth Subtropical Crops Research Institute · CNTropical Crops Genetic Resources Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Flavonoids are important water soluble secondary metabolites in plants, and light is one of the most essential environmental factors regulating flavonoids biosynthesis. In the previous study, we found bagging treatment significantly inhibited the accumulation of flavonols and anthocyanins but promoted the proanthocyanidins accumulation in the fruit peel of mango ( Methods: In this study, RNA-seq was conducted to identify the key pathways and genes involved in the light-regulated flavonoids biosynthesis in mango peel. Results: By weighted gene co-expression network analysis (WGCNA), 16 flavonoids biosynthetic genes were crucial for different flavonoids compositions biosynthesis under bagging treatment in mango. The higher expression level of Discussion: Our results provide new insights of the regulatory effect of light on the flavonoids biosynthesis in mango fruit peel.

Indexed as

bagging treatmentflavonoidsmangoRNA-seqtranscription factor

Identifiers

PMID36743534
PMCPMC9890063
OpenAlexW4317107198

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.