Evidence map›Paper›PMID 36742303›Full record

ArticleFrontiers in immunology2023

New methods for the quantification of mixed chimerism in transplantation.

Christophe Picard, Coralie Frassati, Nicem Cherouat, Sandrine Maioli, Philippe Moskovtchenko, Mathilde Cherel, Jacques Chiaroni, Pascal Pedini

Abstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Christophe PicardImmunogenetic Laboratory, EFS PACC, Marseille, France.
Coralie FrassatiImmunogenetic Laboratory, EFS PACC, Marseille, France.
Nicem CherouatImmunogenetic Laboratory, EFS PACC, Marseille, France.
Sandrine MaioliImmunogenetic Laboratory, EFS PACC, Marseille, France.
Philippe MoskovtchenkoImmunogenetic Laboratory, EFS AURA, Lyon, France.
Mathilde CherelImmunogenetic Laboratory, EFS BRET, Rennes, France.
Jacques ChiaroniImmunogenetic Laboratory, EFS PACC, Marseille, France.
Pascal PediniImmunogenetic Laboratory, EFS PACC, Marseille, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Quantification of chimerism showing the proportion of the donor in a recipient is essential for the follow-up of hematopoietic stem cell transplantation but can also be useful to document an immune tolerance situation after solid organ transplantation. Historically, chimerism has been quantified from genomic DNA, but with technological advances, chimerism from donor-derived cell-free DNA seems particularly relevant in solid organ transplantation. Methods: The reference method was until recently the short tandem repeat technique, but new innovative techniques as digital PCR (dPCR) and NGS, have revolutionized the quantification of chimerism, such as the so-called microchimerism analysis. After a short review of chimerism methods, a comparison of chimerism quantification data for two new digital PCR systems (QIAcuity™ dPCR (Qiagen Results: These new methods were correlated and concordant to routinely methods (r²=0.9978 and r²=0.9974 for dPCR methods, r²=0.9978 and r²=0.9988 for NGS methods), and had similar high performance (sensitivity, reproductibility, linearity). Conclusion: Finally, the choice of the innovative method of chimerism within the laboratory does not depend on the analytical performances because they are similar but mainly on the amount of activity and the access to instruments and computer services.

Indexed as

Hematopoietic Stem Cell TransplantationOrgan TransplantationChimerismPolymerase Chain ReactionTransplantation ChimeracfDNA (cell-free DNA)chimerismdPCR (digital PCR)NGS (next generation sequencing)qPCR (quantitative PCR)

Identifiers

PMID36742303
PMCPMC9892455

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.