Evidence map›Paper›PMID 36741692›Full record

ArticleFrontiers in oncology2022

Prognostic risk analysis related to radioresistance genes in colorectal cancer.

Haoren Qin, Heng Zhang, Haipeng Li, Qiong Xu, Wanjun Sun, Shiwu Zhang, Xipeng Zhang, Siwei Zhu, Hui Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. [Molecular pathology of colorectal cancer].Pathologie (Heidelberg, Germany) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Haoren QinDepartment of Oncology, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Heng ZhangDepartment of Oncology, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Haipeng LiSchool of Integrative Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, China.
Qiong XuSchool of Integrative Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, China.
Wanjun SunDepartment of Oncology, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Shiwu ZhangDepartment of Pathology, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Xipeng ZhangDepartment of Colorectal Surgery, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Siwei ZhuDepartment of Oncology, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Hui WangDepartment of Oncology, Tianjin Union Medical Center, Nankai University, Tianjin, China.
Nankai University · CNTianjin University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Radiotherapy (RT) is one of the most important treatments for patients with colorectal cancer (CRC). Radioresistance is the crucial cause of poor therapeutic outcomes in colorectal cancer. However, the underlying mechanism of radioresistance in colorectal cancer is still poorly defined. Herein we established a radioresistant colorectal cancer cell line and performed transcriptomics analyses to search for the underlying genes that contribute to radioresistance and investigate its association with the prognosis of CRC patients. Methods: The radioresistant cell line was developed from the parental HCT116 cell by a stepwise increased dose of irradiation. Differential gene analysis was performed using cellular transcriptome data to identify genes associated with radioresistance, from which extracellular matrix (ECM) and cell adhesion-related genes were screened. Survival data from a CRC cohort in the TCGA database were used for further model gene screening and validation. The correlation between the risk score model and tumor microenvironment, clinical phenotype, drug treatment sensitivity, and tumor mutation status were also investigated. Results: A total of 493 different expression genes were identified from the radioresistant and wild-type cell line, of which 94 genes were associated with ECM and cell adhesion-related genes. The five model genes Conclusions: The risk score model built with five radioresistance genes in this study, including

Indexed as

colorectal cancerprognostic analysisradioresistanceradiotherapytumor microenvironment

Identifiers

PMID36741692
PMCPMC9890073
OpenAlexW4317107713

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.