Evidence map›Paper›PMID 36740645›Full record

ArticleArchives of virology2023

The genome sequence of lumpy skin disease virus from an outbreak in India suggests a distinct lineage of the virus.

Lenin Bhatt, Rahul C Bhoyar, Bani Jolly, Ravi Israni, Harie Vignesh, Vinod Scaria, Sridhar Sivasubbu

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Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lenin BhattState Disease Diagnostic Centre, Department of Animal Husbandry, 302001, Jaipur, Rajasthan, India.
Rahul C BhoyarCSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, 110025, Delhi, India.
Bani JollyCSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, 110025, Delhi, India.
Ravi IsraniState Disease Diagnostic Centre, Department of Animal Husbandry, 302001, Jaipur, Rajasthan, India.
Harie VigneshCSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, 110025, Delhi, India.
Vinod ScariaCSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, 110025, Delhi, India. vinods@igib.in.ORCID http://orcid.org/0000-0001-7644-7181
Sridhar SivasubbuCSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, 110025, Delhi, India. s.sivasubbu@igib.res.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although previously confined to regions within Africa, lumpy skin disease virus (LSDV) infections have caused significantly large outbreaks in several regions of the world in recent years. In 2019, an outbreak of the disease was reported in India with low rates of morbidity and no reported mortality. However, in 2022, an ongoing outbreak of LSDV spanning over seven states in India resulted in the loss of over 80,000 cattle over a period of three months. Here, we report complete genome sequences of six isolates of LSDV collected from affected cattle during an ongoing outbreak of the disease in Rajasthan, India. Analysis of these sequences showed that the genome isolates from the 2022 outbreak have a large number of genetic variations compared to the reference strain and that they form a distinct genetic lineage. This report thus highlights the importance of genome sequencing and surveillance of transboundary infectious agents to track the prevalence and emergence of variants.

Indexed as

Lumpy Skin DiseaseLumpy skin disease virusAnimalsCattleDisease OutbreaksIndiaPhylogenyIndiaLumpy skin disease virusOutbreakWhole-genome sequencing

Identifiers

PMID36740645

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.