Evidence map›Paper›PMID 36739295›Full record

ArticleScientific reports2023

Coordinated local RNA overexpression of complement induced by interferon gamma in myositis.

Maria Casal-Dominguez, Iago Pinal-Fernandez, Katherine Pak, Sandra Muñoz-Braceras, Jose C Milisenda, Jiram Torres-Ruiz, Stefania Dell Orso, Faiza Naz, Gustavo Gutierrez-Cruz, Yaiza Duque-Jaimez and 13 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 3 countries.

Maria Casal-Dominguez *Muscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Iago Pinal-Fernandez *Muscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA. iago.pinalfernandez@nih.gov.
Katherine PakMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Sandra Muñoz-BracerasMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Jose C MilisendaMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Jiram Torres-RuizMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Stefania Dell OrsoMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Faiza NazMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Gustavo Gutierrez-CruzMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA.
Yaiza Duque-JaimezMuscle Research Unit, Internal Medicine Service, Hospital Clinic, Barcelona, Spain.
Ana Matas-GarciaMuscle Research Unit, Internal Medicine Service, Hospital Clinic, Barcelona, Spain.
Laura Valls-RocaMuscle Research Unit, Internal Medicine Service, Hospital Clinic, Barcelona, Spain.
Gloria GarrabouMuscle Research Unit, Internal Medicine Service, Hospital Clinic, Barcelona, Spain.
Ernesto Trallero-AraguasSystemic Autoimmune Disease Unit, Vall d'Hebron Institute of Research, Barcelona, Spain.
Brian WalittNational Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.
Lisa Christopher-StineDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Thomas E LloydDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Julie J PaikDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Jemima AlbaydaDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Andrea CorseDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Josep Maria GrauMuscle Research Unit, Internal Medicine Service, Hospital Clinic, Barcelona, Spain.
Albert Selva-O'CallaghanSystemic Autoimmune Disease Unit, Vall d'Hebron Institute of Research, Barcelona, Spain.
Andrew L MammenMuscle Disease Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, 50 South Drive, Room 1141, Building 50, MSC 8024, Bethesda, MD, 20892, USA. andrew.mammen@nih.gov.
Johns Hopkins University · USNational Institutes of Health · USUniversitat de Barcelona · ESHospital Clínic de Barcelona · ESConsorci Institut D'Investigacions Biomediques August Pi I Sunyer · ESJohns Hopkins Medicine · USNational Institute of Arthritis and Musculoskeletal and Skin Diseases · USNational Institute of Neurological Disorders and Stroke · USUniversitat Autònoma de Barcelona · ESVall d'Hebron Institut de Recerca · ES

Funding

Post-Viral SyndromesZIANS003157 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI NATH, AVINDRA · 2016 to 2025
$13.5M
High Throughput Next Generation Sequencing: supports genomics and epigenomics research in muscle, skin, bone and autoimmune diseases.ZICAR041207 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI DELL'ORSO, STEFANIA · 2016 to 2025
$12.3M
6 · The paper itself

Abstract

Complement proteins are deposited in the muscles of patients with myositis. However, the local expression and regulation of complement genes within myositis muscle have not been well characterized. In this study, bulk RNA sequencing (RNAseq) analyses of muscle biopsy specimens revealed that complement genes are locally overexpressed and correlate with markers of myositis disease activity, including the expression of interferon-gamma (IFNγ)-induced genes. Single cell and single nuclei RNAseq analyses showed that most local expression of complement genes occurs in macrophages, fibroblasts, and satellite cells, with each cell type expressing different sets of complement genes. Biopsies from immune-mediated necrotizing myopathy patients, who have the lowest levels of IFNγ-induced genes, also had the lowest complement gene expression levels. Furthermore, data from cultured human cells showed that IFNγ upregulates complement expression in macrophages, fibroblasts, and muscle cells. Taken together, our results suggest that in myositis muscle, IFNγ coordinates the local overexpression of complement genes that occurs in several cell types.

Indexed as

Interferon-gammaMyositisComplement System ProteinsHumansMusclesMuscle, SkeletalRNAComplement System ProteinsIFNG protein, humanInterferon-gammaRNA

Identifiers

PMID36739295
PMCPMC9899209
OpenAlexW4319163446

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.