Evidence map›Paper›PMID 36732602›Full record

ReviewNature reviews. Molecular cell biology2023

Regulation of ribosomal RNA gene copy number, transcription and nucleolus organization in eukaryotes.

Yutaro Hori, Christoph Engel, Takehiko Kobayashi

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature reviews. Molecular cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed
19.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Review
  3. Dynamic evolution and hierarchical regulation of rDNA in polyploid oat.The Plant journal : for cell and molecular biology · 2026
    Article
  4. Article
  5. Review
  6. Primer-Less Species Identification Throughout Fungal (International journal of molecular sciences · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Deciphering the impact ofGenes & diseases · 2026
    Article
  11. Article
  12. RiboScreenBiomedicines · 2026
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. A complete human pancreatic cancer genome.bioRxiv : the preprint server for biology · 2026
    Article
  18. Article
  19. Article
  20. Evidence for strong purifying selection of humanProceedings of the National Academy of Sciences of the United States of America · 2026
    Article

41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 3 countries.

Yutaro HoriLaboratory of Genome Regeneration, Institute for Quantitative Biosciences, The University of Tokyo, Tokyo, Japan.
Christoph EngelStructural Biochemistry Group, Regensburg Center for Biochemistry, University of Regensburg, Regensburg, Germany. christoph.engel@ur.de.ORCID 0000-0001-8451-3599
Takehiko KobayashiLaboratory of Genome Regeneration, Institute for Quantitative Biosciences, The University of Tokyo, Tokyo, Japan. tako2015@iqb.u-tokyo.ac.jp.
OTH Regensburg · DEQuantitative BioSciences · USThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the first biological machineries to be created seems to have been the ribosome. Since then, organisms have dedicated great efforts to optimize this apparatus. The ribosomal RNA (rRNA) contained within ribosomes is crucial for protein synthesis and maintenance of cellular function in all known organisms. In eukaryotic cells, rRNA is produced from ribosomal DNA clusters of tandem rRNA genes, whose organization in the nucleolus, maintenance and transcription are strictly regulated to satisfy the substantial demand for rRNA required for ribosome biogenesis. Recent studies have elucidated mechanisms underlying the integrity of ribosomal DNA and regulation of its transcription, including epigenetic mechanisms and a unique recombination and copy-number control system to stably maintain high rRNA gene copy number. In this Review, we disucss how the crucial maintenance of rRNA gene copy number through control of gene amplification and of rRNA production by RNA polymerase I are orchestrated. We also discuss how liquid-liquid phase separation controls the architecture and function of the nucleolus and the relationship between rRNA production, cell senescence and disease.

Indexed as

EukaryotaRNA, RibosomalDNA Copy Number VariationsDNA, RibosomalGene DosageGenes, rRNADNA, RibosomalRNA, Ribosomal

Identifiers

PMID36732602
OpenAlexW4318981890

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.