Evidence map›Paper›PMID 36726237›Full record

ArticleGenome biology and evolution2023

Genome Evolution in Plants: Complex Thalloid Liverworts (Marchantiopsida).

Anna-Malin Linde, Shilpi Singh, John L Bowman, Magnus Eklund, Nils Cronberg, Ulf Lagercrantz

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
18.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Telomere Length Variation in Model Bryophytes.Plants (Basel, Switzerland) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Anna-Malin LindeDepartment of Plant Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Sweden.
Shilpi SinghSchool of Biological Sciences, Monash University, Melbourne, Victoria, Australia.
John L BowmanSchool of Biological Sciences, Monash University, Melbourne, Victoria, Australia.
Magnus EklundDepartment of Plant Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Sweden.
Nils CronbergBiodiversity, Department of Biology, Lund University, Sweden.ORCID 0000-0002-3369-8420
Ulf LagercrantzDepartment of Plant Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Sweden.ORCID 0000-0003-2440-0677
Uppsala University · SEMonash University · AULund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Why do some genomes stay small and simple, while others become huge, and why are some genomes more stable? In contrast to angiosperms and gymnosperms, liverworts are characterized by small genomes with low variation in size and conserved chromosome numbers. We quantified genome evolution among five Marchantiophyta (liverworts), measuring gene characteristics, transposable element (TE) landscape, collinearity, and sex chromosome evolution that might explain the small size and limited variability of liverwort genomes. No genome duplications were identified among examined liverworts and levels of duplicated genes are low. Among the liverwort species, Lunularia cruciata stands out with a genome size almost twice that of the other liverwort species investigated here, and most of this increased size is due to bursts of Ty3/Gypsy retrotransposons. Intrachromosomal rearrangements between examined liverworts are abundant but occur at a slower rate compared with angiosperms. Most genes on L. cruciata scaffolds have their orthologs on homologous Marchantia polymorpha chromosomes, indicating a low degree of rearrangements between chromosomes. Still, translocation of a fragment of the female U chromosome to an autosome was predicted from our data, which might explain the uniquely small U chromosome in L. cruciata. Low levels of gene duplication, TE activity, and chromosomal rearrangements might contribute to the apparent slow rate of morphological evolution in liverworts.

Indexed as

HepatophytaEvolution, MolecularGenome, PlantPhylogenyPlantscollinearityduplicationgenome evolutionsex chromosome evolutiontransposable elements

Identifiers

PMID36726237
PMCPMC9985172
OpenAlexW4318898003

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.