ArticleIMA fungus2023
Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events.
Article in IMA fungus, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 33 citations in OpenAlex.
- Hybrid genome assembly of Penicillium oxalicum UV4 delineates cryptic secondary metabolite pathways and robust lignocellulolytic potential.Archives of microbiology · 2026Article
- Green Mold of Citrus: Recent Insights intoJournal of agricultural and food chemistry · 2026Review
- Unveiling Metabolic Capability and Growth Adaptation ofInternational journal of molecular sciences · 2026Article
- The Volatilomes ofMycobiology · 2026Review
- The first draft genome sequence of Penicillium adametzioides FBCC-F1417, isolated from freshwater plant litter in South Korea.BMC genomic data · 2025Article
- A genomic perspective on fungal diversity and evolution.Nature reviews. Microbiology · 2025Review
- Hybrid assembly ofIMA fungus · 2025Article
- Comparative genome analysis of patulin-producingPeerJ · 2025Article
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- Genome-resolved tracking ofFrontiers in fungal biology · 2025Article
- Omics-Based Comparison of Fungal Virulence Genes, Biosynthetic Gene Clusters, and Small Molecules inJournal of fungi (Basel, Switzerland) · 2024Article
- Gene acquisition by giant transposons primes eukaryotes for rapid evolution via horizontal gene transfer.Science advances · 2024Article
- Regulation of genes encoding polysaccharide-degrading enzymes in Penicillium.Applied microbiology and biotechnology · 2024Review
- Genome sequencing and analysis of penicillin V producing Penicillium rubens strain BIONCL P45 isolated from India.International microbiology : the official journal of the Spanish Society for Microbiology · 2024Article
- Article
- Multiple Horizontal Mini-chromosome Transfers Drive Genome Evolution of Clonal Blast Fungus Lineages.Molecular biology and evolution · 2024Article
- Discovery of Prenyltransferase-Guided Hydroxyphenylacetic Acid Derivatives from Marine FungusMarine drugs · 2024Article
- The Near-GaplessJournal of fungi (Basel, Switzerland) · 2024Article
- Generation, Transfer, and Loss of Alternative Oxidase Paralogues in theJournal of fungi (Basel, Switzerland) · 2023Article
- Article
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Authors and funding
8 authors at 3 institutions in 2 countries.
Funding
Abstract
The Penicillia are known to produce a wide range natural products-some with devastating outcome for the agricultural industry and others with unexploited potential in different applications. However, a large-scale overview of the biosynthetic potential of different species has been lacking. In this study, we sequenced 93 Penicillium isolates and, together with eleven published genomes that hold similar assembly characteristics, we established a species phylogeny as well as defining a Penicillium pangenome. A total of 5612 genes were shared between ≥ 98 isolates corresponding to approximately half of the average number of genes a Penicillium genome holds. We further identified 15 lateral gene transfer events that have occurred in this collection of Penicillium isolates, which might have played an important role, such as niche adaption, in the evolution of these fungi. The comprehensive characterization of the genomic diversity in the Penicillium genus supersedes single-reference genomes, which do not necessarily capture the entire genetic variation.
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