Evidence map›Paper›PMID 36725777›Full record

ArticleJournal of the Association for Research in Otolaryngology : JARO2023

Visualizing Collagen Fibrils in the Cochlea's Tectorial and Basilar Membranes Using a Fluorescently Labeled Collagen-Binding Protein Fragment.

Raquel de Sousa Lobo Ferreira Querido, Xiang Ji, Rabina Lakha, Richard J Goodyear, Guy P Richardson, Christina L Vizcarra, Elizabeth S Olson

Open access · greenAbstract read
In one paragraph

Article in Journal of the Association for Research in Otolaryngology : JARO, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Frontiers in cell and developmental biology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Raquel de Sousa Lobo Ferreira QueridoDepartment of Otolaryngology, Head and Neck Surgery, Columbia University, New York, NY, USA.
Xiang JiDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.ORCID 0000-0002-3603-6676
Rabina LakhaDepartment of Chemistry, Barnard College, New York, NY, USA.
Richard J GoodyearSussex Neuroscience, School of Life Sciences, University of Sussex, Brighton, UK.ORCID 0000-0001-6698-4127
Guy P RichardsonSussex Neuroscience, School of Life Sciences, University of Sussex, Brighton, UK.ORCID 0000-0001-8476-0223
Christina L VizcarraDepartment of Chemistry, Barnard College, New York, NY, USA.ORCID 0000-0003-0564-9776
Elizabeth S OlsonDepartment of Otolaryngology, Head and Neck Surgery, Columbia University, New York, NY, USA. eao2004@columbia.edu.ORCID 0000-0002-3586-7769
Columbia University · USBarnard College · USUniversity of Sussex · GB

Funding

Diversity Supplement to Auditory Mechanics and Cochlear AmplificationR01DC015362 · NIDCD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ELIZABETH S. OLSON · 2016 to 2026
$5.6M
Biotechnology and Biological Sciences Research Council BB/T0163371/1NIDCD NIH HHS R01 DC015362
6 · The paper itself

Abstract

purposeA probe that binds to unfixed collagen fibrils was used to image the shapes and fibrous properties of the TM and BM. The probe (CNA35) is derived from the bacterial adhesion protein CNA. We present confocal images of hydrated gerbil TM, BM, and other cochlear structures stained with fluorescently labeled CNA35. A primary purpose of this article is to describe the use of the CNA35 collagen probe in the cochlea.

methodsRecombinant poly-histidine-tagged CNA35 was expressed in Escherichia coli, purified by cobalt-affinity chromatography, fluorescence labeled, and further purified by gel filtration chromatography. Cochleae from freshly harvested gerbil bullae were irrigated with and then incubated in CNA35 for periods ranging from 2 h - overnight. The cochleae were fixed, decalcified, and dissected. Isolated cochlear turns were imaged by confocal microscopy.

resultsThe CNA35 probe stained the BM and TM, and volumetric imaging revealed the shape of these structures and the collagen fibrils within them. The limbal zone of the TM stained intensely. In samples from the cochlear base, intense staining was detected on the side of the TM that faces hair cells. In the BM pectinate zone, staining was intense at the upper and lower boundaries. The BM arcuate zone was characterized by a prominent longitudinal collagenous structure. The spiral ligament, limbus and lamina stained for collagen, and within the spiral limbus the habenula perforata were outlined with intense staining.

conclusionThe CNA35 probe provides a unique and useful view of collagenous structures in the cochlea.

Indexed as

Basilar MembraneTectorial MembraneAnimalsCochleaCollagenGerbillinaeHair Cells, AuditoryCollagenBasilar membraneCochleaCollagenHabenula perforataTectorial membrane

Identifiers

PMID36725777
PMCPMC10121988
OpenAlexW4318823464

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.